Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239415 |
| length | 659 |
| RNA type | TUCP |
| GC content | 0.53 |
| exon number | 7 |
| gene id | dupd1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 25329209 ~ 25428112 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239457 | lncRNA | upstream | 38244 | 25290741 ~ 25290965 (+) | True | G202342 |
| TU239382 | lncRNA | upstream | 129262 | 25199710 ~ 25199947 (+) | True | G202310 |
| TU239355 | lncRNA | upstream | 139882 | 25186782 ~ 25189327 (+) | False | G202290 |
| TU239356 | lncRNA | upstream | 139882 | 25186782 ~ 25189327 (+) | True | G202290 |
| XR_004579129.1 | lncRNA | upstream | 194044 | 25134451 ~ 25135165 (+) | True | LOC113527241 |
| TU239433 | lncRNA | downstream | 3646 | 25357936 ~ 25428009 (+) | False | dupd1 |
| TU239454 | lncRNA | downstream | 15040 | 25369330 ~ 25369655 (+) | True | G202339 |
| TU239473 | lncRNA | downstream | 49552 | 25403842 ~ 25409006 (+) | False | G202354 |
| TU239474 | lncRNA | downstream | 49552 | 25403842 ~ 25409006 (+) | True | G202354 |
| TU239475 | lncRNA | downstream | 51807 | 25406097 ~ 25407717 (+) | True | G202355 |
| XM_034309510.1 | mRNA | upstream | 58556 | 25260740 ~ 25270653 (+) | True | LOC113527655 |
| XM_026915668.2 | mRNA | upstream | 58556 | 25260740 ~ 25270653 (+) | False | LOC113527655 |
| XM_034309567.1 | mRNA | upstream | 166338 | 25154992 ~ 25162871 (+) | True | LOC113527238 |
| XM_034309604.1 | mRNA | upstream | 175312 | 25146669 ~ 25153897 (+) | True | LOC117598682 |
| XM_026915692.2 | mRNA | upstream | 249380 | 25063600 ~ 25079829 (+) | True | LOC113527669 |
| XM_034309367.1 | mRNA | downstream | 28575 | 25382865 ~ 25386388 (+) | True | LOC117598570 |
| XM_034309370.1 | mRNA | downstream | 32545 | 25386835 ~ 25389881 (+) | True | LOC113524867 |
| XM_034309368.1 | mRNA | downstream | 36407 | 25390697 ~ 25394302 (+) | True | LOC117598571 |
| XM_034309369.1 | mRNA | downstream | 40048 | 25394338 ~ 25398017 (+) | True | LOC117598572 |
| XM_034309206.1 | mRNA | downstream | 46230 | 25400520 ~ 25411259 (+) | True | dupd1 |
| TU239119 | other | upstream | 663684 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 946922 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU238026 | other | upstream | 1930549 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 1999638 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 2122830 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU239521 | other | downstream | 143425 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 143890 | 25498180 ~ 25502628 (+) | True | G202374 |
