Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239433 |
| length | 690 |
| lncRNA type | read_through |
| GC content | 0.52 |
| exon number | 2 |
| gene id | dupd1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 25329209 ~ 25428112 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239457 | lncRNA | upstream | 66971 | 25290741 ~ 25290965 (+) | True | G202342 |
| TU239382 | lncRNA | upstream | 157989 | 25199710 ~ 25199947 (+) | True | G202310 |
| TU239355 | lncRNA | upstream | 168609 | 25186782 ~ 25189327 (+) | False | G202290 |
| TU239356 | lncRNA | upstream | 168609 | 25186782 ~ 25189327 (+) | True | G202290 |
| XR_004579129.1 | lncRNA | upstream | 222771 | 25134451 ~ 25135165 (+) | True | LOC113527241 |
| TU239450 | lncRNA | downstream | 10884 | 25438893 ~ 25442225 (+) | True | G202336 |
| TU239508 | lncRNA | downstream | 35797 | 25463806 ~ 25464167 (+) | True | G202386 |
| TU239525 | lncRNA | downstream | 75135 | 25503144 ~ 25513154 (+) | True | G202400 |
| TU239527 | lncRNA | downstream | 77346 | 25505355 ~ 25565927 (+) | True | G202401 |
| TU239529 | lncRNA | downstream | 81271 | 25509280 ~ 25509506 (+) | True | G202403 |
| XM_034309510.1 | mRNA | upstream | 87283 | 25260740 ~ 25270653 (+) | True | LOC113527655 |
| XM_026915668.2 | mRNA | upstream | 87283 | 25260740 ~ 25270653 (+) | False | LOC113527655 |
| XM_034309567.1 | mRNA | upstream | 195065 | 25154992 ~ 25162871 (+) | True | LOC113527238 |
| XM_034309604.1 | mRNA | upstream | 204039 | 25146669 ~ 25153897 (+) | True | LOC117598682 |
| XM_034309493.1 | mRNA | upstream | 278107 | 25068556 ~ 25079829 (+) | False | LOC113527669 |
| XM_034309478.1 | mRNA | downstream | 281884 | 25709893 ~ 25745120 (+) | True | polr3a |
| XM_034309479.1 | mRNA | downstream | 282003 | 25710012 ~ 25745076 (+) | False | polr3a |
| XM_034309535.1 | mRNA | downstream | 345505 | 25773514 ~ 25791680 (+) | True | tbata |
| XM_026911246.2 | mRNA | downstream | 375780 | 25803789 ~ 25818928 (+) | True | star2 |
| XM_034309498.1 | mRNA | downstream | 541960 | 25969969 ~ 25973840 (+) | True | ndr2 |
| TU239415 | other | upstream | 3646 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239119 | other | upstream | 692411 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 975649 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU238026 | other | upstream | 1959276 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 2028365 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU239521 | other | downstream | 69706 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 70171 | 25498180 ~ 25502628 (+) | True | G202374 |
