Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239529 |
| length | 207 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G202403 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 25509280 ~ 25509506 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239508 | lncRNA | upstream | 45113 | 25463806 ~ 25464167 (+) | True | G202386 |
| TU239450 | lncRNA | upstream | 67055 | 25438893 ~ 25442225 (+) | True | G202336 |
| TU239428 | lncRNA | upstream | 93881 | 25411258 ~ 25415399 (+) | False | dupd1 |
| TU239474 | lncRNA | upstream | 100274 | 25403842 ~ 25409006 (+) | True | G202354 |
| TU239546 | lncRNA | downstream | 44899 | 25554405 ~ 25557800 (+) | True | G202420 |
| TU239565 | lncRNA | downstream | 76849 | 25586355 ~ 25586764 (+) | True | G202439 |
| TU239571 | lncRNA | downstream | 89269 | 25598775 ~ 25602438 (+) | True | G202445 |
| TU239584 | lncRNA | downstream | 131530 | 25641036 ~ 25697150 (+) | True | G202455 |
| TU239586 | lncRNA | downstream | 138883 | 25648389 ~ 25649882 (+) | True | G202457 |
| XM_034309206.1 | mRNA | upstream | 98021 | 25400520 ~ 25411259 (+) | True | dupd1 |
| XM_034309369.1 | mRNA | upstream | 111263 | 25394338 ~ 25398017 (+) | True | LOC117598572 |
| XM_034309368.1 | mRNA | upstream | 114978 | 25390697 ~ 25394302 (+) | True | LOC117598571 |
| XM_034309370.1 | mRNA | upstream | 119399 | 25386835 ~ 25389881 (+) | True | LOC113524867 |
| XM_034309367.1 | mRNA | upstream | 122892 | 25382865 ~ 25386388 (+) | True | LOC117598570 |
| XM_034309478.1 | mRNA | downstream | 200387 | 25709893 ~ 25745120 (+) | True | polr3a |
| XM_034309479.1 | mRNA | downstream | 200506 | 25710012 ~ 25745076 (+) | False | polr3a |
| XM_034309535.1 | mRNA | downstream | 264008 | 25773514 ~ 25791680 (+) | True | tbata |
| XM_026911246.2 | mRNA | downstream | 294283 | 25803789 ~ 25818928 (+) | True | star2 |
| XM_034309498.1 | mRNA | downstream | 460463 | 25969969 ~ 25973840 (+) | True | ndr2 |
| TU239496 | other | upstream | 6652 | 25498180 ~ 25502628 (+) | True | G202374 |
| TU239521 | other | upstream | 10361 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239415 | other | upstream | 154990 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239119 | other | upstream | 843755 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 1126993 | 24381787 ~ 24382287 (+) | True | G201962 |
