Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239598 |
| length | 762 |
| lncRNA type | read_through |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G202467 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 25692079 ~ 25782711 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239586 | lncRNA | upstream | 42197 | 25648389 ~ 25649882 (+) | True | G202457 |
| TU239571 | lncRNA | upstream | 89641 | 25598775 ~ 25602438 (+) | True | G202445 |
| TU239565 | lncRNA | upstream | 105315 | 25586355 ~ 25586764 (+) | True | G202439 |
| TU239546 | lncRNA | upstream | 134279 | 25554405 ~ 25557800 (+) | True | G202420 |
| TU239529 | lncRNA | upstream | 182573 | 25509280 ~ 25509506 (+) | True | G202403 |
| TU239682 | lncRNA | downstream | 166160 | 25948871 ~ 25968572 (+) | True | G202541 |
| TU239683 | lncRNA | downstream | 166160 | 25948871 ~ 25957298 (+) | False | G202541 |
| TU239703 | lncRNA | downstream | 206397 | 25989108 ~ 25995087 (+) | True | G202557 |
| TU239706 | lncRNA | downstream | 217037 | 25999748 ~ 26000315 (+) | False | LOC117598538 |
| TU239722 | lncRNA | downstream | 250429 | 26033140 ~ 26033815 (+) | False | G202567 |
| XM_034309206.1 | mRNA | upstream | 280820 | 25400520 ~ 25411259 (+) | True | dupd1 |
| XM_034309369.1 | mRNA | upstream | 294062 | 25394338 ~ 25398017 (+) | True | LOC117598572 |
| XM_034309368.1 | mRNA | upstream | 297777 | 25390697 ~ 25394302 (+) | True | LOC117598571 |
| XM_034309370.1 | mRNA | upstream | 302198 | 25386835 ~ 25389881 (+) | True | LOC113524867 |
| XM_034309367.1 | mRNA | upstream | 305691 | 25382865 ~ 25386388 (+) | True | LOC117598570 |
| XM_026911246.2 | mRNA | downstream | 21078 | 25803789 ~ 25818928 (+) | True | star2 |
| XM_034309498.1 | mRNA | downstream | 187258 | 25969969 ~ 25973840 (+) | True | ndr2 |
| XM_034309310.1 | mRNA | downstream | 192320 | 25975031 ~ 25981707 (+) | False | lrrc20 |
| XM_034309308.1 | mRNA | downstream | 193933 | 25976644 ~ 25981707 (+) | False | lrrc20 |
| XM_034309309.1 | mRNA | downstream | 193940 | 25976651 ~ 25981707 (+) | False | lrrc20 |
| TU239496 | other | upstream | 189451 | 25498180 ~ 25502628 (+) | True | G202374 |
| TU239521 | other | upstream | 193160 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239415 | other | upstream | 337789 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239119 | other | upstream | 1026554 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 1309792 | 24381787 ~ 24382287 (+) | True | G201962 |
