Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239723 |
| length | 516 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G202567 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 26033140 ~ 26033815 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239706 | lncRNA | upstream | 32930 | 25999748 ~ 26000315 (+) | False | LOC117598538 |
| TU239703 | lncRNA | upstream | 38158 | 25989108 ~ 25995087 (+) | True | G202557 |
| TU239682 | lncRNA | upstream | 64673 | 25948871 ~ 25968572 (+) | True | G202541 |
| TU239683 | lncRNA | upstream | 75947 | 25948871 ~ 25957298 (+) | False | G202541 |
| TU239598 | lncRNA | upstream | 250534 | 25692079 ~ 25782711 (+) | False | G202467 |
| XR_004579260.1 | lncRNA | downstream | 25809 | 26059624 ~ 26064285 (+) | True | LOC117598627 |
| TU239757 | lncRNA | downstream | 84909 | 26118724 ~ 26137814 (+) | True | G202593 |
| TU240017 | lncRNA | downstream | 170843 | 26204658 ~ 26207793 (+) | True | G202761 |
| TU240018 | lncRNA | downstream | 171530 | 26205345 ~ 26207793 (+) | False | G202761 |
| TU240073 | lncRNA | downstream | 336191 | 26370006 ~ 26383059 (+) | False | G202804 |
| XM_034309306.1 | mRNA | upstream | 27420 | 26000353 ~ 26005825 (+) | False | LOC117598538 |
| XM_034309305.1 | mRNA | upstream | 28276 | 25999651 ~ 26004969 (+) | True | LOC117598538 |
| XM_034309303.1 | mRNA | upstream | 28276 | 26000353 ~ 26004969 (+) | False | LOC117598538 |
| XM_034309304.1 | mRNA | upstream | 28276 | 26000353 ~ 26004969 (+) | False | LOC117598538 |
| XM_034309308.1 | mRNA | upstream | 51538 | 25976644 ~ 25981707 (+) | False | lrrc20 |
| XM_034309543.1 | mRNA | downstream | 251859 | 26285674 ~ 26426786 (+) | True | sdk2b |
| XM_034309542.1 | mRNA | downstream | 353037 | 26386852 ~ 26426786 (+) | False | sdk2b |
| XM_034309447.1 | mRNA | downstream | 393034 | 26426849 ~ 26429873 (+) | True | LOC117598613 |
| XM_034309448.1 | mRNA | downstream | 403228 | 26437043 ~ 26444597 (+) | True | LOC113547530 |
| XM_034309449.1 | mRNA | downstream | 403228 | 26437043 ~ 26444597 (+) | False | LOC113547530 |
| TU239496 | other | upstream | 530617 | 25498180 ~ 25502628 (+) | True | G202374 |
| TU239521 | other | upstream | 534326 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239415 | other | upstream | 678955 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239119 | other | upstream | 1367720 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 1650958 | 24381787 ~ 24382287 (+) | True | G201962 |
