Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026914512.2 |
| length | 1236 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | capgb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 23402183 ~ 23420064 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| K10368 | CAPG; capping protein (actin filament), gelsolin-like |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU238025 | lncRNA | upstream | 3523 | 23272574 ~ 23398660 (+) | False | polr2a |
| TU238079 | lncRNA | upstream | 21193 | 23375074 ~ 23380990 (+) | True | G201234 |
| TU238060 | lncRNA | upstream | 88778 | 23312078 ~ 23313405 (+) | False | LOC117595720 |
| TU238015 | lncRNA | upstream | 132764 | 23268627 ~ 23269419 (+) | True | G201186 |
| TU238014 | lncRNA | upstream | 132764 | 23268792 ~ 23269419 (+) | False | G201186 |
| TU238092 | lncRNA | downstream | 39938 | 23460002 ~ 23460455 (+) | True | G201240 |
| TU238120 | lncRNA | downstream | 222342 | 23642406 ~ 23688417 (+) | False | afap1 |
| TU238141 | lncRNA | downstream | 280655 | 23700719 ~ 23729010 (+) | True | G201281 |
| TU238144 | lncRNA | downstream | 298983 | 23719047 ~ 23722939 (+) | True | G201284 |
| TU238157 | lncRNA | downstream | 318293 | 23738357 ~ 23740340 (+) | True | G201297 |
| XM_034309273.1 | mRNA | upstream | 3520 | 23381744 ~ 23398663 (+) | True | polr2a |
| XM_034309049.1 | mRNA | upstream | 80955 | 23315593 ~ 23321228 (+) | True | LOC113527736 |
| XM_026915816.2 | mRNA | upstream | 80955 | 23315596 ~ 23321228 (+) | False | LOC113527736 |
| XM_034309602.1 | mRNA | upstream | 84029 | 23311260 ~ 23318154 (+) | True | LOC117595720 |
| XM_026914971.2 | mRNA | upstream | 136783 | 23239297 ~ 23265400 (+) | True | hdlbpb |
| XM_026914799.2 | mRNA | downstream | 6811 | 23426875 ~ 23436725 (+) | False | si:dkey-219e21.2 |
| XM_026914798.2 | mRNA | downstream | 6811 | 23426875 ~ 23436724 (+) | True | si:dkey-219e21.2 |
| XM_026915767.2 | mRNA | downstream | 27079 | 23447143 ~ 23459505 (+) | True | mfsd8 |
| XM_034309526.1 | mRNA | downstream | 46293 | 23466357 ~ 23472229 (+) | True | si:dkey-219e21.4 |
| XM_034309028.1 | mRNA | downstream | 120960 | 23541024 ~ 23600132 (+) | True | ablim2 |
| TU238026 | other | upstream | 3523 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 72612 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 195804 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU237829 | other | upstream | 530899 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| XR_003402874.2 | other | upstream | 1389879 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU238950 | other | downstream | 961723 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 1241161 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU239415 | other | downstream | 1909145 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 2077651 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 2078116 | 25498180 ~ 25502628 (+) | True | G202374 |
