Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309088.1 |
| length | 1147 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | si:ch211-141o9.10 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 11136857 ~ 11141931 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230204 | lncRNA | upstream | 18134 | 11120318 ~ 11120550 (+) | True | G194380 |
| TU230113 | lncRNA | upstream | 42506 | 11093163 ~ 11096178 (+) | True | G194293 |
| TU230188 | lncRNA | upstream | 75002 | 11062164 ~ 11063682 (+) | True | G194365 |
| TU230097 | lncRNA | upstream | 170651 | 10965638 ~ 10968033 (+) | True | G194278 |
| TU230092 | lncRNA | upstream | 173067 | 10964950 ~ 10965617 (+) | True | G194276 |
| TU230242 | lncRNA | downstream | 105832 | 11247763 ~ 11248107 (+) | False | si:ch73-139e5.4 |
| TU230438 | lncRNA | downstream | 236530 | 11378461 ~ 11379190 (+) | True | G194571 |
| TU230527 | lncRNA | downstream | 450961 | 11592892 ~ 11593091 (+) | True | G194627 |
| TU230523 | lncRNA | downstream | 455599 | 11597530 ~ 11602441 (+) | True | G194623 |
| TU230532 | lncRNA | downstream | 472458 | 11614389 ~ 11621269 (+) | True | tmem106a |
| XM_026915656.2 | mRNA | upstream | 38181 | 11096965 ~ 11100503 (+) | False | maff |
| XM_026915654.2 | mRNA | upstream | 38181 | 11097033 ~ 11100503 (+) | True | maff |
| XM_026915655.2 | mRNA | upstream | 38181 | 11097218 ~ 11100503 (+) | False | maff |
| XM_026915487.2 | mRNA | upstream | 200805 | 10912118 ~ 10937879 (+) | True | shisa9a |
| XM_026914905.2 | mRNA | downstream | 8151 | 11150082 ~ 11158390 (+) | False | cdc42ep1a |
| XM_026914906.2 | mRNA | downstream | 8151 | 11150082 ~ 11158390 (+) | True | cdc42ep1a |
| XM_026914907.2 | mRNA | downstream | 8151 | 11150082 ~ 11158390 (+) | False | cdc42ep1a |
| XM_026914997.2 | mRNA | downstream | 44394 | 11186325 ~ 11200049 (+) | False | zc3h7bb |
| XM_034309323.1 | mRNA | downstream | 44806 | 11186737 ~ 11200049 (+) | True | zc3h7bb |
| trnal-aag_8 | other | upstream | 1074058 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 1503617 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 1624849 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 1626053 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| trnaq-cug_13 | other | upstream | 1626444 | 9512169 ~ 9512240 (+) | False | trnaq-cug_13 |
| trnaq-cug_16 | other | downstream | 144266 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| TU231182 | other | downstream | 1330752 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 2341370 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 2341370 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 5713839 | 16855770 ~ 16863495 (+) | False | anapc16 |
