Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026914774.2 |
| length | 1168 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | cabcoco1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 7812450 ~ 7838426 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU227775 | lncRNA | upstream | 337446 | 7474437 ~ 7475004 (+) | True | G192422 |
| TU227745 | lncRNA | upstream | 412822 | 7399343 ~ 7399628 (+) | True | G192394 |
| TU227373 | lncRNA | upstream | 1026854 | 6778164 ~ 6785596 (+) | True | G192043 |
| TU227359 | lncRNA | upstream | 1084059 | 6725985 ~ 6728391 (+) | True | LOC113527389 |
| TU227354 | lncRNA | upstream | 1115480 | 6696732 ~ 6696970 (+) | True | G192029 |
| TU228011 | lncRNA | downstream | 100615 | 7939041 ~ 7939584 (+) | True | G192591 |
| TU228075 | lncRNA | downstream | 230717 | 8069143 ~ 8071592 (+) | True | G192650 |
| TU228069 | lncRNA | downstream | 288347 | 8126773 ~ 8141060 (+) | True | G192644 |
| XR_004579326.1 | lncRNA | downstream | 420788 | 8259214 ~ 8261423 (+) | True | LOC117598703 |
| TU228175 | lncRNA | downstream | 430722 | 8269148 ~ 8270226 (+) | True | G192716 |
| XM_034309630.1 | mRNA | upstream | 16550 | 7772344 ~ 7795900 (+) | False | rhobtb1 |
| XM_026915840.2 | mRNA | upstream | 16550 | 7779330 ~ 7795900 (+) | True | rhobtb1 |
| XM_034309631.1 | mRNA | upstream | 16550 | 7782165 ~ 7795900 (+) | False | rhobtb1 |
| XM_026915843.2 | mRNA | upstream | 16550 | 7782756 ~ 7795900 (+) | False | rhobtb1 |
| XM_034309632.1 | mRNA | upstream | 16550 | 7785484 ~ 7795900 (+) | False | rhobtb1 |
| XM_026915042.2 | mRNA | downstream | 13985 | 7852411 ~ 7938614 (+) | True | arid5b |
| XM_026914661.2 | mRNA | downstream | 135793 | 7974219 ~ 7977168 (+) | True | adoa |
| XM_026915712.2 | mRNA | downstream | 173438 | 8011864 ~ 8019214 (+) | True | nrbf2b |
| XM_026915094.2 | mRNA | downstream | 310853 | 8149279 ~ 8177199 (+) | True | reep3b |
| XM_034309364.1 | mRNA | downstream | 323123 | 8161549 ~ 8177199 (+) | False | reep3b |
| TU227843 | other | upstream | 184339 | 7605981 ~ 7628111 (+) | True | G192484 |
| TU227741 | other | upstream | 376078 | 7428579 ~ 7436372 (+) | True | tfam |
| XR_003402840.2 | other | upstream | 978193 | 6822740 ~ 6834257 (+) | False | asah2 |
| trnap-cgg_7 | other | upstream | 1022505 | 6789874 ~ 6789945 (+) | True | trnap-cgg_7 |
| trnap-ugg_20 | other | upstream | 1023684 | 6788695 ~ 6788766 (+) | True | trnap-ugg_20 |
| trnaa-ugc_7 | other | downstream | 1269260 | 9107686 ~ 9107757 (+) | True | trnaa-ugc_7 |
| trnal-aag_6 | other | downstream | 1269426 | 9107852 ~ 9107933 (+) | True | trnal-aag_6 |
| trnad-guc_4 | other | downstream | 1426348 | 9264774 ~ 9264845 (+) | True | trnad-guc_4 |
| trnad-guc_5 | other | downstream | 1427837 | 9266263 ~ 9266334 (+) | True | trnad-guc_5 |
| TU228915 | other | downstream | 1430216 | 9268642 ~ 9271331 (+) | False | LOC113527534 |
