Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309504.1 |
| length | 679 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 5 |
| gene id | si:dkey-21c1.4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 14250465 ~ 14253655 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232456 | lncRNA | upstream | 58552 | 14190839 ~ 14191913 (+) | True | G196294 |
| TU232453 | lncRNA | upstream | 76692 | 14173290 ~ 14173773 (+) | True | G196291 |
| TU232454 | lncRNA | upstream | 80653 | 14169308 ~ 14169812 (+) | True | G196292 |
| TU232451 | lncRNA | upstream | 84450 | 14163571 ~ 14166015 (+) | True | G196289 |
| TU232423 | lncRNA | upstream | 123434 | 14126518 ~ 14127031 (+) | True | G196265 |
| TU232472 | lncRNA | downstream | 10521 | 14264176 ~ 14264386 (+) | True | G196307 |
| XR_004579315.1 | lncRNA | downstream | 26579 | 14280234 ~ 14287826 (+) | True | LOC117598693 |
| TU232442 | lncRNA | downstream | 33704 | 14287359 ~ 14324281 (+) | True | qki2 |
| TU232479 | lncRNA | downstream | 73447 | 14327102 ~ 14327360 (+) | True | G196312 |
| TU232482 | lncRNA | downstream | 84308 | 14337963 ~ 14338270 (+) | True | G196315 |
| XM_026915204.2 | mRNA | upstream | 4316 | 14237392 ~ 14246149 (+) | True | tepsin |
| XM_026915931.2 | mRNA | upstream | 17178 | 14208899 ~ 14233287 (+) | True | slc38a10 |
| XM_034309653.1 | mRNA | upstream | 216322 | 14013612 ~ 14034143 (+) | False | tha1 |
| XM_026914595.2 | mRNA | upstream | 216322 | 14022576 ~ 14034143 (+) | True | tha1 |
| XM_026915894.2 | mRNA | upstream | 254296 | 13992223 ~ 13996169 (+) | True | socs3b |
| XM_026915426.2 | mRNA | downstream | 11691 | 14265346 ~ 14266594 (+) | True | tbcc |
| XM_026915700.2 | mRNA | downstream | 15021 | 14268676 ~ 14271524 (+) | True | prph2a |
| XM_034309281.1 | mRNA | downstream | 42636 | 14296291 ~ 14323797 (+) | False | qki2 |
| XM_026914988.2 | mRNA | downstream | 42636 | 14296291 ~ 14323797 (+) | False | qki2 |
| XM_026914990.2 | mRNA | downstream | 42636 | 14296291 ~ 14323797 (+) | False | qki2 |
| XR_004579176.1 | other | upstream | 691952 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 692036 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 1776726 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 2964197 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 4185839 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| TU234137 | other | downstream | 2602115 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 3323628 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 3901496 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 4188231 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 4552430 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
