Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402874.2 |
| length | 1226 |
| RNA type | misc_RNA |
| GC content | 0.56 |
| exon number | 4 |
| gene id | srsf2a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 22008511 ~ 22012304 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237320 | lncRNA | upstream | 8619 | 21999686 ~ 21999892 (+) | True | G200569 |
| TU237312 | lncRNA | upstream | 19757 | 21988186 ~ 21988754 (+) | True | G200561 |
| TU237311 | lncRNA | upstream | 20642 | 21987520 ~ 21987869 (+) | True | G200560 |
| TU237310 | lncRNA | upstream | 21510 | 21986362 ~ 21987001 (+) | True | G200559 |
| TU237307 | lncRNA | upstream | 29130 | 21979083 ~ 21979381 (+) | True | G200556 |
| TU237327 | lncRNA | downstream | 1502 | 22013806 ~ 22026481 (+) | True | LOC113527202 |
| TU237575 | lncRNA | downstream | 102102 | 22114406 ~ 22114822 (+) | True | G200779 |
| TU237582 | lncRNA | downstream | 111929 | 22124233 ~ 22242312 (+) | True | G200784 |
| TU237612 | lncRNA | downstream | 335586 | 22347890 ~ 22348118 (+) | True | G200807 |
| TU237831 | lncRNA | downstream | 854604 | 22866908 ~ 22868838 (+) | True | G201019 |
| XM_026914657.2 | mRNA | upstream | 41764 | 21961174 ~ 21966747 (+) | True | nat9 |
| XM_026914659.2 | mRNA | upstream | 42234 | 21961118 ~ 21966277 (+) | False | nat9 |
| XM_026914660.2 | mRNA | upstream | 42234 | 21961171 ~ 21966277 (+) | False | nat9 |
| XM_026914870.2 | mRNA | upstream | 49293 | 21936415 ~ 21959218 (+) | True | itgb3b |
| XM_026915823.2 | mRNA | upstream | 218284 | 21783029 ~ 21790227 (+) | True | kcnj2a |
| XM_034309366.1 | mRNA | downstream | 1772 | 22014076 ~ 22025694 (+) | False | LOC113527202 |
| XM_026914805.2 | mRNA | downstream | 16785 | 22029089 ~ 22035625 (+) | True | LOC113527221 |
| XM_034309324.1 | mRNA | downstream | 25668 | 22037972 ~ 22089270 (+) | True | si:ch211-119c20.2 |
| XM_026914927.2 | mRNA | downstream | 25668 | 22037972 ~ 22089270 (+) | False | si:ch211-119c20.2 |
| XM_026914928.2 | mRNA | downstream | 25668 | 22037972 ~ 22089270 (+) | False | si:ch211-119c20.2 |
| TU237322 | other | upstream | 5237 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_004579324.1 | other | upstream | 2441827 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| XR_004579138.1 | other | upstream | 3196249 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | upstream | 3196999 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
| TU235296 | other | upstream | 3498352 | 18441886 ~ 18510159 (+) | True | G198737 |
| TU237829 | other | downstream | 785877 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| TU237980 | other | downstream | 1193362 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU238054 | other | downstream | 1311769 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU238026 | other | downstream | 1345207 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238950 | other | downstream | 2369483 | 24381787 ~ 24382287 (+) | True | G201962 |
