Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309287.1 |
| length | 848 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | mrpl43 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 13795093 ~ 13797650 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232108 | lncRNA | upstream | 99332 | 13693715 ~ 13695761 (+) | True | G195994 |
| TU231960 | lncRNA | upstream | 176154 | 13618664 ~ 13618939 (+) | True | G195857 |
| TU231948 | lncRNA | upstream | 277207 | 13514676 ~ 13517886 (+) | True | G195847 |
| TU231926 | lncRNA | upstream | 328110 | 13466765 ~ 13466983 (+) | True | G195839 |
| XR_003402861.2 | lncRNA | upstream | 728471 | 13063864 ~ 13066622 (+) | True | LOC113527319 |
| TU232344 | lncRNA | downstream | 215923 | 14013573 ~ 14016247 (+) | False | tha1 |
| TU232348 | lncRNA | downstream | 225937 | 14023587 ~ 14043932 (+) | True | G196202 |
| TU232423 | lncRNA | downstream | 328868 | 14126518 ~ 14127031 (+) | True | G196265 |
| TU232451 | lncRNA | downstream | 365921 | 14163571 ~ 14166015 (+) | True | G196289 |
| TU232454 | lncRNA | downstream | 371658 | 14169308 ~ 14169812 (+) | True | G196292 |
| XM_026914976.2 | mRNA | upstream | 36560 | 13736448 ~ 13758533 (+) | True | psme4b |
| XM_026915199.2 | mRNA | upstream | 139246 | 13640177 ~ 13655847 (+) | True | entpd1 |
| XM_034309429.1 | mRNA | upstream | 139246 | 13645640 ~ 13655847 (+) | False | entpd1 |
| XM_026915200.2 | mRNA | upstream | 139246 | 13647179 ~ 13655847 (+) | False | entpd1 |
| XM_026915185.2 | mRNA | upstream | 177929 | 13614199 ~ 13617164 (+) | True | crygmx |
| XM_026915837.2 | mRNA | downstream | 28457 | 13826107 ~ 13836370 (+) | True | mfsd13a |
| XM_026915381.2 | mRNA | downstream | 39758 | 13837408 ~ 13848679 (+) | True | trim8b |
| XM_026915702.2 | mRNA | downstream | 63734 | 13861384 ~ 13871004 (+) | True | sfxn2 |
| XM_026915321.2 | mRNA | downstream | 90859 | 13888509 ~ 13933419 (+) | False | cyth1b |
| XM_026915319.2 | mRNA | downstream | 100953 | 13898603 ~ 13933419 (+) | False | cyth1b |
| XR_004579176.1 | other | upstream | 236580 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 236664 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 1321354 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 2508825 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 3730467 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| TU234137 | other | downstream | 3058120 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 3779633 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 4357501 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 4644236 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 5008435 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
