Item | Value |
---|---|
RNA id | XM_034309609.1 |
length | 1393 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 7 |
gene id | zgc:92313 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047606.1 |
NCBI id | CM018552.1 |
chromosome length | 26563515 |
location | 5692120 ~ 5709289 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0006508 | proteolysis | biological_process |
GO:0004252 | serine-type endopeptidase activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU226656 | lncRNA | downstream | 2552 | 5688594 ~ 5689568 (-) | True | G191468 |
TU226652 | lncRNA | downstream | 22367 | 5667884 ~ 5669753 (-) | True | G191464 |
TU226650 | lncRNA | downstream | 24274 | 5666173 ~ 5667846 (-) | True | G191463 |
TU226605 | lncRNA | downstream | 203009 | 5488817 ~ 5489111 (-) | False | gdpd3b |
TU226604 | lncRNA | downstream | 207453 | 5482620 ~ 5484667 (-) | True | G191424 |
TU226688 | lncRNA | upstream | 31090 | 5739978 ~ 5740199 (-) | True | G191490 |
TU226700 | lncRNA | upstream | 59640 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
TU226871 | lncRNA | upstream | 226651 | 5935539 ~ 5938163 (-) | True | LOC113527731 |
TU226870 | lncRNA | upstream | 226765 | 5935653 ~ 5938163 (-) | False | LOC113527731 |
TU226872 | lncRNA | upstream | 226765 | 5935653 ~ 5938213 (-) | False | LOC113527731 |
XM_026915461.2 | mRNA | downstream | 14159 | 5674724 ~ 5677961 (-) | True | vkorc1 |
XM_026915836.2 | mRNA | downstream | 73130 | 5614430 ~ 5618990 (-) | True | aldoab |
XM_026915644.2 | mRNA | downstream | 119231 | 5555957 ~ 5572889 (-) | True | si:ch211-180a12.2 |
XM_034309295.1 | mRNA | downstream | 137215 | 5545841 ~ 5554905 (-) | False | LOC117598535 |
XM_034309355.1 | mRNA | upstream | 61987 | 5770875 ~ 5791270 (-) | True | LOC113527291 |
XM_026914891.2 | mRNA | upstream | 98932 | 5807820 ~ 5814472 (-) | True | LOC113527266 |
XM_026914889.2 | mRNA | upstream | 108804 | 5817692 ~ 5849431 (-) | True | LOC113527265 |
XM_034309034.1 | mRNA | upstream | 158053 | 5866941 ~ 5882707 (-) | True | irf3 |
XM_026914580.2 | mRNA | upstream | 176617 | 5885505 ~ 5903485 (-) | True | prr12a |
TU226617 | other | downstream | 78166 | 5611120 ~ 5613954 (-) | True | G191430 |
trnav-uac_7 | other | downstream | 218650 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
trnai-uau_5 | other | downstream | 389915 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
TU226226 | other | downstream | 628725 | 5059527 ~ 5063395 (-) | False | LOC113527048 |
TU226185 | other | downstream | 739261 | 4949163 ~ 4952859 (-) | True | G191056 |
TU226699 | other | upstream | 59640 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
XR_004579320.1 | other | upstream | 839183 | 6548071 ~ 6594390 (-) | False | itga3b |
trnap-agg_9 | other | upstream | 2749439 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
trnal-uag_3 | other | upstream | 2766371 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
XR_004579166.1 | other | upstream | 3138774 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |