Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026947824.2 |
| length | 975 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 4 |
| gene id | LOC113547471 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2979306 ~ 2982750 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224982 | lncRNA | downstream | 68051 | 2911012 ~ 2911255 (-) | True | G190048 |
| TU224779 | lncRNA | downstream | 151499 | 2796507 ~ 2827807 (-) | True | G189882 |
| TU224786 | lncRNA | downstream | 169387 | 2806601 ~ 2809919 (-) | False | LOC113547504 |
| TU224782 | lncRNA | downstream | 176342 | 2792827 ~ 2802964 (-) | True | G189885 |
| TU225014 | lncRNA | upstream | 94281 | 3077031 ~ 3077290 (-) | True | G190076 |
| TU225033 | lncRNA | upstream | 173161 | 3155911 ~ 3156150 (-) | True | G190094 |
| TU225036 | lncRNA | upstream | 188133 | 3170883 ~ 3171571 (-) | True | G190097 |
| TU225038 | lncRNA | upstream | 190310 | 3173060 ~ 3173967 (-) | True | G190099 |
| TU225044 | lncRNA | upstream | 191327 | 3174077 ~ 3175635 (-) | True | G190100 |
| XM_026947919.2 | mRNA | downstream | 4162 | 2971330 ~ 2975144 (-) | True | mylpfb |
| XM_026947911.2 | mRNA | downstream | 11577 | 2957439 ~ 2967729 (-) | True | pgap3 |
| XM_026947856.2 | mRNA | downstream | 26402 | 2924595 ~ 2952904 (-) | True | erbb2 |
| XM_026947845.2 | mRNA | downstream | 82958 | 2874516 ~ 2896348 (-) | True | pth3r |
| XM_026947848.2 | mRNA | downstream | 114317 | 2856236 ~ 2864989 (-) | True | rundc3ab |
| XM_026947865.2 | mRNA | upstream | 2908 | 2985658 ~ 2989177 (-) | True | LOC113547497 |
| XM_026947867.2 | mRNA | upstream | 14216 | 2996966 ~ 2998281 (-) | True | LOC113547499 |
| XM_026947866.2 | mRNA | upstream | 25515 | 3008265 ~ 3020759 (-) | True | LOC113547498 |
| XM_026947854.2 | mRNA | upstream | 50298 | 3033048 ~ 3068141 (-) | False | LOC113547488 |
| XM_026947853.2 | mRNA | upstream | 50298 | 3033048 ~ 3068141 (-) | True | LOC113547488 |
| TU224811 | other | downstream | 123813 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| TU224780 | other | downstream | 164726 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | downstream | 173400 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| XR_003404831.2 | other | downstream | 768327 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 1408233 | 1568286 ~ 1571073 (-) | True | G189199 |
| trnap-cgg_2 | other | upstream | 1916024 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 1917216 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
| trnap-ugg_3 | other | upstream | 1918386 | 4901136 ~ 4901207 (-) | True | trnap-ugg_3 |
| trnap-ugg_4 | other | upstream | 1919578 | 4902328 ~ 4902399 (-) | True | trnap-ugg_4 |
| trnap-ugg_5 | other | upstream | 1920871 | 4903621 ~ 4903691 (-) | True | trnap-ugg_5 |
