Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026947915.2 |
| length | 680 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 6 |
| gene id | LOC113547534 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 3261534 ~ 3265222 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02885 | RP-L19e, RPL19; large subunit ribosomal protein L19e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224964 | lncRNA | upstream | 26924 | 3234389 ~ 3234610 (+) | True | G190033 |
| TU224958 | lncRNA | upstream | 39225 | 3221937 ~ 3222309 (+) | True | G190027 |
| TU224911 | lncRNA | upstream | 110053 | 3062072 ~ 3151481 (+) | False | G189987 |
| TU225095 | lncRNA | downstream | 279 | 3265501 ~ 3265710 (+) | True | G190122 |
| TU225137 | lncRNA | downstream | 87436 | 3352658 ~ 3352920 (+) | True | G190160 |
| TU225147 | lncRNA | downstream | 101872 | 3367094 ~ 3367293 (+) | True | G190170 |
| TU225208 | lncRNA | downstream | 165091 | 3430313 ~ 3432405 (+) | False | LOC113547484 |
| XR_004579240.1 | lncRNA | downstream | 211848 | 3477070 ~ 3482359 (+) | True | LOC117598604 |
| XM_026947880.2 | mRNA | upstream | 7732 | 3251702 ~ 3253802 (+) | True | LOC113547507 |
| XM_026947879.2 | mRNA | upstream | 12310 | 3244122 ~ 3249224 (+) | True | pkmyt1 |
| XM_026947840.2 | mRNA | upstream | 85882 | 3169668 ~ 3175652 (+) | True | pelo |
| XM_026947819.2 | mRNA | upstream | 125368 | 3129716 ~ 3136166 (+) | True | sult1st6 |
| XM_026947820.2 | mRNA | upstream | 125368 | 3129716 ~ 3136166 (+) | False | sult1st6 |
| XM_026947858.2 | mRNA | downstream | 150982 | 3416204 ~ 3417931 (+) | True | LOC113547491 |
| XM_034309054.1 | mRNA | downstream | 165217 | 3430439 ~ 3453426 (+) | True | LOC113547484 |
| XM_034309053.1 | mRNA | downstream | 169334 | 3434556 ~ 3453426 (+) | False | LOC113547484 |
| XM_034309055.1 | mRNA | downstream | 169343 | 3434565 ~ 3453426 (+) | False | LOC113547484 |
| XM_034309408.1 | mRNA | downstream | 401931 | 3667153 ~ 3680599 (+) | False | prdm9 |
| TU224959 | other | upstream | 22318 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU224822 | other | upstream | 239925 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224820 | other | upstream | 271606 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224759 | other | upstream | 500524 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU223925 | other | upstream | 1596197 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| TU225191 | other | downstream | 136045 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU225438 | other | downstream | 516909 | 3782131 ~ 3782495 (+) | False | rasd1 |
| trnae-cuc_25 | other | downstream | 1168019 | 4433241 ~ 4433312 (+) | True | trnae-cuc_25 |
| TU225847 | other | downstream | 1327885 | 4593107 ~ 4595113 (+) | False | lrrc18b |
| TU225934 | other | downstream | 1489875 | 4755097 ~ 4839369 (+) | False | G190865 |
