Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579315.1 |
| length | 348 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC117598693 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 14280234 ~ 14287826 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232472 | lncRNA | upstream | 15848 | 14264176 ~ 14264386 (+) | True | G196307 |
| TU232456 | lncRNA | upstream | 88321 | 14190839 ~ 14191913 (+) | True | G196294 |
| TU232453 | lncRNA | upstream | 106461 | 14173290 ~ 14173773 (+) | True | G196291 |
| TU232454 | lncRNA | upstream | 110422 | 14169308 ~ 14169812 (+) | True | G196292 |
| TU232451 | lncRNA | upstream | 114219 | 14163571 ~ 14166015 (+) | True | G196289 |
| TU232479 | lncRNA | downstream | 39276 | 14327102 ~ 14327360 (+) | True | G196312 |
| TU232482 | lncRNA | downstream | 50137 | 14337963 ~ 14338270 (+) | True | G196315 |
| TU232527 | lncRNA | downstream | 236079 | 14523905 ~ 14526083 (+) | True | G196360 |
| TU232554 | lncRNA | downstream | 290080 | 14577906 ~ 14578458 (+) | True | G196378 |
| TU232565 | lncRNA | downstream | 309952 | 14597778 ~ 14601439 (+) | True | G196386 |
| XM_026915700.2 | mRNA | upstream | 8710 | 14268676 ~ 14271524 (+) | True | prph2a |
| XM_026915426.2 | mRNA | upstream | 13640 | 14265346 ~ 14266594 (+) | True | tbcc |
| XM_026915135.2 | mRNA | upstream | 26579 | 14250465 ~ 14253655 (+) | True | si:dkey-21c1.4 |
| XM_034309504.1 | mRNA | upstream | 26579 | 14250465 ~ 14253655 (+) | False | si:dkey-21c1.4 |
| XM_034309505.1 | mRNA | upstream | 26579 | 14250465 ~ 14253655 (+) | False | si:dkey-21c1.4 |
| XM_034309281.1 | mRNA | downstream | 8465 | 14296291 ~ 14323797 (+) | False | qki2 |
| XM_026914988.2 | mRNA | downstream | 8465 | 14296291 ~ 14323797 (+) | False | qki2 |
| XM_026914990.2 | mRNA | downstream | 8465 | 14296291 ~ 14323797 (+) | False | qki2 |
| XM_034309282.1 | mRNA | downstream | 8465 | 14296291 ~ 14323797 (+) | False | qki2 |
| XM_026914991.2 | mRNA | downstream | 8465 | 14296291 ~ 14323797 (+) | False | qki2 |
| XR_004579176.1 | other | upstream | 721721 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 721805 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 1806495 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 2993966 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 4215608 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| TU234137 | other | downstream | 2567944 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 3289457 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 3867325 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 4154060 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 4518259 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
