Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnap-agg_2 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.61 |
| exon number | 1 |
| gene id | trnap-agg_2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 4899966 ~ 4900037 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU225963 | lncRNA | downstream | 149089 | 4701104 ~ 4750877 (-) | True | G190885 |
| TU225914 | lncRNA | downstream | 233395 | 4666312 ~ 4666571 (-) | True | G190849 |
| TU225890 | lncRNA | downstream | 303143 | 4596539 ~ 4596823 (-) | True | G190829 |
| TU225878 | lncRNA | downstream | 324436 | 4573682 ~ 4575530 (-) | True | G190821 |
| TU225794 | lncRNA | downstream | 611163 | 4288417 ~ 4288803 (-) | True | G190742 |
| TU226166 | lncRNA | upstream | 11697 | 4911734 ~ 4918977 (-) | True | trnap-cgg_3 |
| TU226433 | lncRNA | upstream | 482958 | 5382995 ~ 5387137 (-) | True | G191279 |
| TU226592 | lncRNA | upstream | 542925 | 5442962 ~ 5445167 (-) | True | G191413 |
| TU226604 | lncRNA | upstream | 582583 | 5482620 ~ 5484667 (-) | True | G191424 |
| TU226605 | lncRNA | upstream | 588780 | 5488817 ~ 5489111 (-) | False | gdpd3b |
| XM_026915586.2 | mRNA | downstream | 50288 | 4837911 ~ 4849678 (-) | True | fam20a |
| XM_034309628.1 | mRNA | downstream | 72614 | 4810652 ~ 4827352 (-) | False | zdhhc16b |
| XM_026915838.2 | mRNA | downstream | 79381 | 4810652 ~ 4820585 (-) | False | zdhhc16b |
| XM_026915839.2 | mRNA | downstream | 82275 | 4810652 ~ 4817691 (-) | True | zdhhc16b |
| XM_034309184.1 | mRNA | downstream | 112390 | 4770544 ~ 4787576 (-) | True | ubtd1b |
| XM_034309046.1 | mRNA | upstream | 91905 | 4991942 ~ 4998332 (-) | True | pagr1 |
| XM_026914518.2 | mRNA | upstream | 159461 | 5059498 ~ 5063418 (-) | True | LOC113527048 |
| XM_026914728.2 | mRNA | upstream | 356227 | 5256264 ~ 5265357 (-) | True | g6pc3 |
| XM_026914669.2 | mRNA | upstream | 389675 | 5289712 ~ 5294398 (-) | True | tmem101 |
| XM_034309110.1 | mRNA | upstream | 412207 | 5312244 ~ 5322475 (-) | True | LOC113527073 |
| trnap-cgg_2 | other | downstream | 1121 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| TU224811 | other | downstream | 2044473 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| TU224780 | other | downstream | 2085386 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | downstream | 2094060 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| XR_003404831.2 | other | downstream | 2688987 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| trnap-ugg_3 | other | upstream | 1099 | 4901136 ~ 4901207 (-) | True | trnap-ugg_3 |
| trnap-ugg_4 | other | upstream | 2291 | 4902328 ~ 4902399 (-) | True | trnap-ugg_4 |
| trnap-ugg_5 | other | upstream | 3584 | 4903621 ~ 4903691 (-) | True | trnap-ugg_5 |
| trnap-ugg_6 | other | upstream | 4771 | 4904808 ~ 4904878 (-) | True | trnap-ugg_6 |
| trnap-ugg_7 | other | upstream | 5958 | 4905995 ~ 4906065 (-) | True | trnap-ugg_7 |
