Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU24621 |
| length | 283 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G20675 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 2745608 ~ 2747092 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU24582 | lncRNA | downstream | 82978 | 2662312 ~ 2662630 (-) | True | G20644 |
| TU24581 | lncRNA | downstream | 83903 | 2661434 ~ 2661705 (-) | True | G20643 |
| TU24568 | lncRNA | downstream | 111928 | 2604707 ~ 2633680 (-) | False | LOC113545802 |
| TU24492 | lncRNA | downstream | 195061 | 2550346 ~ 2550547 (-) | True | G20567 |
| TU24459 | lncRNA | downstream | 290174 | 2455230 ~ 2455434 (-) | True | G20537 |
| TU24760 | lncRNA | upstream | 201086 | 2948178 ~ 2948401 (-) | True | G20801 |
| TU24911 | lncRNA | upstream | 316158 | 3063250 ~ 3064519 (-) | True | G20920 |
| TU24912 | lncRNA | upstream | 316158 | 3063250 ~ 3064519 (-) | False | G20920 |
| TU24955 | lncRNA | upstream | 338512 | 3085604 ~ 3085949 (-) | True | G20942 |
| TU24958 | lncRNA | upstream | 345583 | 3092675 ~ 3093630 (-) | True | G20945 |
| XM_026945644.2 | mRNA | downstream | 3837 | 2738445 ~ 2741771 (-) | True | ghrl |
| XM_034312045.1 | mRNA | downstream | 24265 | 2717897 ~ 2721343 (-) | True | zgc:152986 |
| XM_034311186.1 | mRNA | downstream | 29941 | 2702380 ~ 2715667 (-) | True | LOC113545857 |
| XM_034311190.1 | mRNA | downstream | 45256 | 2688030 ~ 2700352 (-) | True | LOC113545965 |
| XM_026945652.2 | mRNA | downstream | 58714 | 2667822 ~ 2686894 (-) | True | LOC113545966 |
| XM_026945502.2 | mRNA | upstream | 12761 | 2759853 ~ 2803605 (-) | False | slc4a8 |
| XM_026945501.2 | mRNA | upstream | 12761 | 2759853 ~ 2803518 (-) | False | slc4a8 |
| XM_034312792.1 | mRNA | upstream | 12761 | 2759853 ~ 2788227 (-) | False | slc4a8 |
| XM_034312787.1 | mRNA | upstream | 12761 | 2759853 ~ 2788226 (-) | False | slc4a8 |
| XM_034312803.1 | mRNA | upstream | 12761 | 2759853 ~ 2787689 (-) | True | slc4a8 |
| TU24006 | other | downstream | 923046 | 1812759 ~ 1822562 (-) | False | slc9a7 |
| TU23548 | other | downstream | 1708034 | 1028859 ~ 1037574 (-) | False | slc48a1b |
| trnaq-uug_1 | other | downstream | 1784001 | 961536 ~ 961607 (-) | True | trnaq-uug_1 |
| XR_004577153.1 | other | downstream | 2092590 | 652731 ~ 653018 (-) | True | LOC117595970 |
| XR_004577109.1 | other | downstream | 2147799 | 596887 ~ 597809 (-) | False | LOC113545844 |
| trnaf-gaa_13 | other | upstream | 290192 | 3037284 ~ 3037356 (-) | True | trnaf-gaa_13 |
| XR_004580246.1 | other | upstream | 970623 | 3717715 ~ 3736886 (-) | False | npepl1 |
| XR_004579840.1 | other | upstream | 1002926 | 3750018 ~ 3777988 (-) | True | rab22a |
| TU25557 | other | upstream | 1509576 | 4256668 ~ 4257087 (-) | True | G21434 |
| trnaf-gaa_14 | other | upstream | 1585007 | 4332099 ~ 4332171 (-) | True | trnaf-gaa_14 |
