Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU25498 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G21382 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 4009131 ~ 4009340 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU25493 | lncRNA | downstream | 9495 | 3993879 ~ 3999636 (-) | True | G21377 |
| TU25470 | lncRNA | downstream | 76563 | 3932136 ~ 3932568 (-) | True | G21358 |
| TU25413 | lncRNA | downstream | 223577 | 3785140 ~ 3785554 (-) | True | G21306 |
| TU25404 | lncRNA | downstream | 294088 | 3713299 ~ 3715043 (-) | True | G21303 |
| TU25222 | lncRNA | downstream | 352459 | 3656395 ~ 3656672 (-) | True | G21153 |
| XR_004579415.1 | lncRNA | upstream | 35224 | 4044564 ~ 4062409 (-) | True | LOC113545971 |
| XR_004579416.1 | lncRNA | upstream | 35224 | 4044564 ~ 4048218 (-) | False | LOC113545971 |
| TU25521 | lncRNA | upstream | 67788 | 4077128 ~ 4077827 (-) | True | G21400 |
| TU25449 | lncRNA | upstream | 101942 | 4111282 ~ 4111654 (-) | True | G21341 |
| TU25441 | lncRNA | upstream | 113655 | 4122995 ~ 4127844 (-) | True | G21333 |
| XM_026945608.2 | mRNA | downstream | 554 | 4004622 ~ 4008577 (-) | False | si:ch211-181l5.2 |
| XM_026945607.2 | mRNA | downstream | 554 | 4004622 ~ 4008577 (-) | True | si:ch211-181l5.2 |
| XM_034314247.1 | mRNA | downstream | 50312 | 3938000 ~ 3958819 (-) | False | stx16 |
| XM_034314242.1 | mRNA | downstream | 50312 | 3938000 ~ 3958819 (-) | True | stx16 |
| XM_034314260.1 | mRNA | downstream | 50313 | 3938000 ~ 3958818 (-) | False | stx16 |
| XM_026945452.2 | mRNA | upstream | 14450 | 4023790 ~ 4025978 (-) | True | si:busm1-52i16.2 |
| XM_026945639.2 | mRNA | upstream | 24731 | 4034071 ~ 4039284 (-) | True | cldn10a |
| XM_026945430.2 | mRNA | upstream | 349780 | 4359120 ~ 4365171 (-) | True | prelid3b |
| XM_034310026.1 | mRNA | upstream | 349780 | 4359120 ~ 4365128 (-) | False | prelid3b |
| XM_026945646.2 | mRNA | upstream | 466512 | 4475852 ~ 4483914 (-) | True | LOC113545959 |
| XR_004579840.1 | other | downstream | 231143 | 3750018 ~ 3777988 (-) | True | rab22a |
| XR_004580246.1 | other | downstream | 272245 | 3717715 ~ 3736886 (-) | False | npepl1 |
| trnaf-gaa_13 | other | downstream | 971775 | 3037284 ~ 3037356 (-) | True | trnaf-gaa_13 |
| TU24006 | other | downstream | 2186569 | 1812759 ~ 1822562 (-) | False | slc9a7 |
| TU23548 | other | downstream | 2971557 | 1028859 ~ 1037574 (-) | False | slc48a1b |
| TU25557 | other | upstream | 247328 | 4256668 ~ 4257087 (-) | True | G21434 |
| trnaf-gaa_14 | other | upstream | 322759 | 4332099 ~ 4332171 (-) | True | trnaf-gaa_14 |
| XR_004577457.1 | other | upstream | 438027 | 4447367 ~ 4447479 (-) | True | LOC117596284 |
| XR_004577458.1 | other | upstream | 448996 | 4458336 ~ 4458447 (-) | True | LOC117596286 |
| XR_003404665.2 | other | upstream | 803935 | 4813275 ~ 4902011 (-) | False | obsl1a |
