Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU25557 |
| length | 420 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G21434 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 4256668 ~ 4257087 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU25540 | lncRNA | downstream | 1306 | 4245757 ~ 4255362 (-) | True | LOC113545816 |
| XR_003404661.2 | lncRNA | downstream | 1476 | 4249442 ~ 4255192 (-) | False | LOC113545816 |
| XR_004579507.1 | lncRNA | downstream | 1477 | 4249442 ~ 4255191 (-) | False | LOC113545816 |
| XR_003404659.2 | lncRNA | downstream | 1484 | 4249442 ~ 4255184 (-) | False | LOC113545816 |
| XR_003404660.2 | lncRNA | downstream | 1484 | 4249445 ~ 4255184 (-) | False | LOC113545816 |
| TU25564 | lncRNA | upstream | 14722 | 4271809 ~ 4272029 (-) | True | G21441 |
| TU25634 | lncRNA | upstream | 97012 | 4354099 ~ 4354315 (-) | True | G21486 |
| TU25710 | lncRNA | upstream | 170106 | 4427193 ~ 4429341 (-) | True | G21546 |
| TU25719 | lncRNA | upstream | 185769 | 4442856 ~ 4443450 (-) | True | G21552 |
| TU25721 | lncRNA | upstream | 188716 | 4445803 ~ 4446215 (-) | True | G21554 |
| XM_026945639.2 | mRNA | downstream | 217384 | 4034071 ~ 4039284 (-) | True | cldn10a |
| XM_026945452.2 | mRNA | downstream | 230690 | 4023790 ~ 4025978 (-) | True | si:busm1-52i16.2 |
| XM_026945608.2 | mRNA | downstream | 248091 | 4004622 ~ 4008577 (-) | False | si:ch211-181l5.2 |
| XM_026945607.2 | mRNA | downstream | 248091 | 4004622 ~ 4008577 (-) | True | si:ch211-181l5.2 |
| XM_034314247.1 | mRNA | downstream | 297849 | 3938000 ~ 3958819 (-) | False | stx16 |
| XM_026945430.2 | mRNA | upstream | 102033 | 4359120 ~ 4365171 (-) | True | prelid3b |
| XM_034310026.1 | mRNA | upstream | 102033 | 4359120 ~ 4365128 (-) | False | prelid3b |
| XM_026945646.2 | mRNA | upstream | 218765 | 4475852 ~ 4483914 (-) | True | LOC113545959 |
| XM_026945449.2 | mRNA | upstream | 333297 | 4590384 ~ 4618467 (-) | True | igfbp2a |
| XM_026945422.2 | mRNA | upstream | 460323 | 4717410 ~ 4719627 (-) | True | inha |
| XR_004579840.1 | other | downstream | 478680 | 3750018 ~ 3777988 (-) | True | rab22a |
| XR_004580246.1 | other | downstream | 519782 | 3717715 ~ 3736886 (-) | False | npepl1 |
| trnaf-gaa_13 | other | downstream | 1219312 | 3037284 ~ 3037356 (-) | True | trnaf-gaa_13 |
| TU24006 | other | downstream | 2434106 | 1812759 ~ 1822562 (-) | False | slc9a7 |
| TU23548 | other | downstream | 3219094 | 1028859 ~ 1037574 (-) | False | slc48a1b |
| trnaf-gaa_14 | other | upstream | 75012 | 4332099 ~ 4332171 (-) | True | trnaf-gaa_14 |
| XR_004577457.1 | other | upstream | 190280 | 4447367 ~ 4447479 (-) | True | LOC117596284 |
| XR_004577458.1 | other | upstream | 201249 | 4458336 ~ 4458447 (-) | True | LOC117596286 |
| XR_003404665.2 | other | upstream | 556188 | 4813275 ~ 4902011 (-) | False | obsl1a |
| XR_003404666.2 | other | upstream | 564250 | 4821337 ~ 4902011 (-) | False | obsl1a |
