Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU26390 |
| length | 910 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G22126 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 5799103 ~ 5800012 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU26327 | lncRNA | upstream | 4412 | 5793084 ~ 5794691 (+) | True | G22072 |
| TU26387 | lncRNA | upstream | 12644 | 5782306 ~ 5786459 (+) | True | G22123 |
| TU26366 | lncRNA | upstream | 89932 | 5708966 ~ 5709171 (+) | True | G22110 |
| TU26352 | lncRNA | upstream | 98127 | 5700728 ~ 5700976 (+) | True | G22097 |
| TU26298 | lncRNA | upstream | 188872 | 5548476 ~ 5610231 (+) | True | G22054 |
| TU26394 | lncRNA | downstream | 4931 | 5804943 ~ 5807667 (+) | True | G22130 |
| TU26322 | lncRNA | downstream | 10745 | 5810757 ~ 5811035 (+) | True | G22070 |
| TU26329 | lncRNA | downstream | 14335 | 5814347 ~ 5816578 (+) | True | G22074 |
| TU26331 | lncRNA | downstream | 25104 | 5825116 ~ 5826948 (+) | True | G22076 |
| TU26395 | lncRNA | downstream | 29286 | 5829298 ~ 5829650 (+) | True | G22131 |
| XM_026913686.2 | mRNA | upstream | 42415 | 5717537 ~ 5756688 (+) | True | rbl1 |
| XM_026918775.2 | mRNA | upstream | 98434 | 5680066 ~ 5700669 (+) | True | si:dkey-6e2.2 |
| XM_026912152.2 | mRNA | upstream | 246129 | 5549840 ~ 5552974 (+) | False | mych |
| XM_034310062.1 | mRNA | upstream | 246129 | 5550065 ~ 5552974 (+) | True | mych |
| XM_026915809.2 | mRNA | upstream | 260666 | 5522925 ~ 5538437 (+) | False | ergic3 |
| XM_034298497.1 | mRNA | downstream | 89569 | 5889581 ~ 5948452 (+) | True | ripor3 |
| XM_026937631.2 | mRNA | downstream | 168186 | 5968198 ~ 5976002 (+) | True | tmem74b |
| XM_034310334.1 | mRNA | downstream | 236702 | 6036714 ~ 6049905 (+) | True | abraa |
| XM_026923429.2 | mRNA | downstream | 236702 | 6036714 ~ 6049905 (+) | False | abraa |
| XM_026923599.2 | mRNA | downstream | 236702 | 6036714 ~ 6049905 (+) | False | abraa |
| XR_003402786.2 | other | upstream | 45999 | 5717530 ~ 5753104 (+) | False | rbl1 |
| TU26124 | other | upstream | 590239 | 5208346 ~ 5208864 (+) | True | G21901 |
| TU26030 | other | upstream | 710525 | 5088134 ~ 5088578 (+) | True | G21835 |
| XR_004579614.1 | other | upstream | 1039458 | 4754266 ~ 4759645 (+) | True | spega |
| XR_003404681.1 | other | upstream | 1138980 | 4660009 ~ 4660123 (+) | True | LOC113545978 |
| TU28587 | other | downstream | 3650913 | 9450925 ~ 9454462 (+) | False | hmga1b |
| TU28588 | other | downstream | 3650913 | 9450925 ~ 9454462 (+) | True | hmga1b |
| XR_004577034.1 | other | downstream | 3791929 | 9591941 ~ 9596854 (+) | False | LOC113532547 |
| TU28879 | other | downstream | 4095233 | 9895245 ~ 9907171 (+) | False | LOC113530691 |
| TU29055 | other | downstream | 4397954 | 10197966 ~ 10198455 (+) | True | G24500 |
