Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU29333 |
| length | 234 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G24751 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 10452249 ~ 10452762 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403528.2 | lncRNA | upstream | 56705 | 10381401 ~ 10395544 (+) | True | LOC113534804 |
| TU29248 | lncRNA | upstream | 131453 | 10320531 ~ 10320796 (+) | True | G24670 |
| TU29246 | lncRNA | upstream | 133420 | 10318618 ~ 10318829 (+) | True | G24668 |
| TU29236 | lncRNA | upstream | 204872 | 10246944 ~ 10247377 (+) | True | G24658 |
| TU29231 | lncRNA | upstream | 214127 | 10237886 ~ 10238122 (+) | True | G24653 |
| TU29341 | lncRNA | downstream | 36526 | 10489288 ~ 10490288 (+) | True | G24759 |
| TU29576 | lncRNA | downstream | 368705 | 10821467 ~ 10847125 (+) | True | G24989 |
| TU29633 | lncRNA | downstream | 463294 | 10916056 ~ 10918504 (+) | True | G25035 |
| TU29719 | lncRNA | downstream | 781360 | 11234122 ~ 11234603 (+) | True | G25110 |
| XR_004579381.1 | lncRNA | downstream | 872648 | 11325410 ~ 11327031 (+) | True | LOC117598838 |
| XM_026930188.2 | mRNA | upstream | 84232 | 10354311 ~ 10368017 (+) | False | tfap2c |
| XM_034300033.1 | mRNA | upstream | 84232 | 10354327 ~ 10368017 (+) | False | tfap2c |
| XM_026930172.2 | mRNA | upstream | 84232 | 10356414 ~ 10368017 (+) | True | tfap2c |
| XM_026930180.2 | mRNA | upstream | 84232 | 10356414 ~ 10368017 (+) | False | tfap2c |
| XM_026916832.2 | mRNA | upstream | 136724 | 10289199 ~ 10315525 (+) | True | rtf2 |
| XM_026927245.2 | mRNA | downstream | 481942 | 10934704 ~ 10974521 (+) | True | necab3 |
| XM_034299987.1 | mRNA | downstream | 485773 | 10938535 ~ 10974521 (+) | False | necab3 |
| XM_026923214.2 | mRNA | downstream | 575546 | 11028308 ~ 11058982 (+) | True | snta1 |
| XM_034312255.1 | mRNA | downstream | 760583 | 11213345 ~ 11252653 (+) | True | ralgapb |
| XM_034312256.1 | mRNA | downstream | 760583 | 11213345 ~ 11252653 (+) | False | ralgapb |
| TU29055 | other | upstream | 253794 | 10197966 ~ 10198455 (+) | True | G24500 |
| TU28879 | other | upstream | 545078 | 9895245 ~ 9907171 (+) | False | LOC113530691 |
| XR_004577034.1 | other | upstream | 855395 | 9591941 ~ 9596854 (+) | False | LOC113532547 |
| TU28587 | other | upstream | 997787 | 9450925 ~ 9454462 (+) | False | hmga1b |
| XR_003403740.2 | other | downstream | 301753 | 10754515 ~ 10754622 (+) | True | LOC113537259 |
| TU29627 | other | downstream | 453438 | 10906200 ~ 10908572 (+) | True | G25029 |
| TU30526 | other | downstream | 1751767 | 12204529 ~ 12207257 (+) | False | si:dkeyp-67f1.2 |
| TU30617 | other | downstream | 2073408 | 12526170 ~ 12527491 (+) | True | G25908 |
| TU31442 | other | downstream | 2813265 | 13266027 ~ 13331868 (+) | False | si:dkey-238f9.1 |
