Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU30029 |
| length | 566 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G25387 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 11484801 ~ 11485366 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30016 | lncRNA | upstream | 23456 | 11461122 ~ 11461345 (+) | True | G25374 |
| TU30014 | lncRNA | upstream | 24330 | 11460261 ~ 11460471 (+) | True | G25372 |
| TU30013 | lncRNA | upstream | 26797 | 11457778 ~ 11458004 (+) | True | G25371 |
| TU29997 | lncRNA | upstream | 39365 | 11445124 ~ 11445436 (+) | True | G25357 |
| TU29996 | lncRNA | upstream | 40217 | 11444167 ~ 11444584 (+) | True | G25356 |
| TU30050 | lncRNA | downstream | 94372 | 11579738 ~ 11580030 (+) | True | G25408 |
| TU30052 | lncRNA | downstream | 100041 | 11585407 ~ 11585643 (+) | True | G25410 |
| TU30064 | lncRNA | downstream | 133803 | 11619169 ~ 11623069 (+) | True | G25422 |
| TU30080 | lncRNA | downstream | 176864 | 11662230 ~ 11663094 (+) | True | G25434 |
| XR_004579590.1 | lncRNA | downstream | 183453 | 11668819 ~ 11688224 (+) | True | LOC117599151 |
| XM_034298674.1 | mRNA | upstream | 28711 | 11452072 ~ 11456090 (+) | True | LOC117595871 |
| XM_026926305.2 | mRNA | upstream | 65361 | 11408776 ~ 11419440 (+) | True | igsf8 |
| XM_026926314.2 | mRNA | upstream | 65361 | 11408776 ~ 11419440 (+) | False | igsf8 |
| XM_034299433.1 | mRNA | upstream | 65361 | 11408776 ~ 11419440 (+) | False | igsf8 |
| XM_026923552.2 | mRNA | upstream | 127148 | 11353572 ~ 11357653 (+) | True | sp7 |
| XM_026919898.2 | mRNA | downstream | 1371 | 11486737 ~ 11500516 (+) | True | dctn2 |
| XM_026919906.2 | mRNA | downstream | 1371 | 11486737 ~ 11500516 (+) | False | dctn2 |
| XM_026919915.2 | mRNA | downstream | 1371 | 11486737 ~ 11500516 (+) | False | dctn2 |
| XM_026919922.2 | mRNA | downstream | 1372 | 11486738 ~ 11500516 (+) | False | dctn2 |
| XM_026925428.2 | mRNA | downstream | 32128 | 11517494 ~ 11520910 (+) | True | ddit3 |
| TU29627 | other | upstream | 576229 | 10906200 ~ 10908572 (+) | True | G25029 |
| XR_003403740.2 | other | upstream | 730179 | 10754515 ~ 10754622 (+) | True | LOC113537259 |
| TU29055 | other | upstream | 1286346 | 10197966 ~ 10198455 (+) | True | G24500 |
| TU28879 | other | upstream | 1577630 | 9895245 ~ 9907171 (+) | False | LOC113530691 |
| XR_004577034.1 | other | upstream | 1887947 | 9591941 ~ 9596854 (+) | False | LOC113532547 |
| TU30526 | other | downstream | 719163 | 12204529 ~ 12207257 (+) | False | si:dkeyp-67f1.2 |
| TU30617 | other | downstream | 1040804 | 12526170 ~ 12527491 (+) | True | G25908 |
| TU31442 | other | downstream | 1780661 | 13266027 ~ 13331868 (+) | False | si:dkey-238f9.1 |
| XR_004577014.1 | other | downstream | 2010490 | 13495856 ~ 13499365 (+) | False | tshba |
| XR_004577009.1 | other | downstream | 2010491 | 13495857 ~ 13499365 (+) | False | tshba |
