Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026921662.2 |
| length | 680 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | tshba |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 13490161 ~ 13506004 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31582 | lncRNA | upstream | 1204 | 13490161 ~ 13497729 (+) | False | tshba |
| XR_003403407.2 | lncRNA | upstream | 124437 | 13351846 ~ 13374496 (+) | False | LOC113533310 |
| XR_003403408.2 | lncRNA | upstream | 125123 | 13351846 ~ 13373810 (+) | True | LOC113533310 |
| XR_003403409.2 | lncRNA | upstream | 125123 | 13351846 ~ 13373810 (+) | False | LOC113533310 |
| TU31025 | lncRNA | upstream | 590839 | 12855396 ~ 12908094 (+) | True | G26266 |
| TU31688 | lncRNA | downstream | 120477 | 13626481 ~ 13629466 (+) | True | G26848 |
| TU31730 | lncRNA | downstream | 316380 | 13822384 ~ 13825226 (+) | True | G26873 |
| TU31732 | lncRNA | downstream | 328235 | 13834239 ~ 13836347 (+) | True | G26875 |
| TU31741 | lncRNA | downstream | 367311 | 13873315 ~ 13873523 (+) | True | G26884 |
| TU31779 | lncRNA | downstream | 494927 | 14000931 ~ 14054690 (+) | True | G26921 |
| XM_034300793.1 | mRNA | upstream | 8856 | 13467442 ~ 13490077 (+) | True | sycp1 |
| XM_026929119.2 | mRNA | upstream | 32612 | 13456562 ~ 13466321 (+) | True | LOC113535652 |
| XM_026941676.2 | mRNA | upstream | 50804 | 13441193 ~ 13448129 (+) | True | LOC113543455 |
| XM_026924017.2 | mRNA | upstream | 166756 | 13265788 ~ 13332177 (+) | True | si:dkey-238f9.1 |
| XM_034312744.1 | mRNA | downstream | 4324 | 13510328 ~ 13515529 (+) | False | slc25a55a |
| XM_034312745.1 | mRNA | downstream | 5569 | 13511573 ~ 13515529 (+) | True | slc25a55a |
| XM_026927279.2 | mRNA | downstream | 64755 | 13570759 ~ 13578479 (+) | True | LOC113534455 |
| XM_026927289.2 | mRNA | downstream | 64755 | 13570759 ~ 13578479 (+) | False | LOC113534455 |
| XM_026927047.2 | mRNA | downstream | 79088 | 13585092 ~ 13590794 (+) | True | LOC113534264 |
| TU31442 | other | upstream | 167065 | 13266027 ~ 13331868 (+) | False | si:dkey-238f9.1 |
| TU30617 | other | upstream | 971442 | 12526170 ~ 12527491 (+) | True | G25908 |
| TU30526 | other | upstream | 1291676 | 12204529 ~ 12207257 (+) | False | si:dkeyp-67f1.2 |
| TU29627 | other | upstream | 2590361 | 10906200 ~ 10908572 (+) | True | G25029 |
| XR_003403740.2 | other | upstream | 2744311 | 10754515 ~ 10754622 (+) | True | LOC113537259 |
| trnaf-gaa_15 | other | downstream | 1685580 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004580083.1 | other | downstream | 1772823 | 15278827 ~ 15294354 (+) | False | fancd2 |
| TU33403 | other | downstream | 2675314 | 16181318 ~ 16182303 (+) | False | mustn1a |
| TU34871 | other | downstream | 5268766 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 5311398 | 18817402 ~ 18817475 (+) | True | trnai-aau |
