Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU31779 |
| length | 436 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G26921 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 14000931 ~ 14054690 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31741 | lncRNA | upstream | 127408 | 13873315 ~ 13873523 (+) | True | G26884 |
| TU31732 | lncRNA | upstream | 164584 | 13834239 ~ 13836347 (+) | True | G26875 |
| TU31730 | lncRNA | upstream | 175705 | 13822384 ~ 13825226 (+) | True | G26873 |
| TU31688 | lncRNA | upstream | 371465 | 13626481 ~ 13629466 (+) | True | G26848 |
| TU31569 | lncRNA | upstream | 483528 | 13434904 ~ 13517403 (+) | True | G26749 |
| TU32056 | lncRNA | downstream | 115090 | 14169780 ~ 14172077 (+) | True | G27164 |
| TU32160 | lncRNA | downstream | 415400 | 14470090 ~ 14470420 (+) | True | G27262 |
| TU32167 | lncRNA | downstream | 436090 | 14490780 ~ 14491136 (+) | True | G27269 |
| TU32173 | lncRNA | downstream | 441522 | 14496212 ~ 14496858 (+) | True | G27275 |
| TU32208 | lncRNA | downstream | 500561 | 14555251 ~ 14555465 (+) | True | G27309 |
| XM_026916723.2 | mRNA | upstream | 70140 | 13912064 ~ 13930791 (+) | True | mtmr14 |
| XM_026916732.2 | mRNA | upstream | 70140 | 13912065 ~ 13930791 (+) | False | mtmr14 |
| XM_034311755.1 | mRNA | upstream | 136262 | 13836547 ~ 13864669 (+) | False | setd5 |
| XM_026920665.2 | mRNA | downstream | 45517 | 14100207 ~ 14113930 (+) | True | aldh1l1 |
| XM_026920681.2 | mRNA | downstream | 45541 | 14100231 ~ 14113930 (+) | False | aldh1l1 |
| XM_026920689.2 | mRNA | downstream | 48823 | 14103513 ~ 14113930 (+) | False | aldh1l1 |
| XM_026920673.2 | mRNA | downstream | 48876 | 14103566 ~ 14113930 (+) | False | aldh1l1 |
| XM_026922220.2 | mRNA | downstream | 63293 | 14117983 ~ 14129183 (+) | True | LOC113531458 |
| XR_004577012.1 | other | upstream | 499635 | 13498298 ~ 13501296 (+) | False | tshba |
| XR_004577009.1 | other | upstream | 501566 | 13495857 ~ 13499365 (+) | False | tshba |
| trnaf-gaa_15 | other | downstream | 1136894 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004580083.1 | other | downstream | 1224137 | 15278827 ~ 15294354 (+) | False | fancd2 |
| TU33403 | other | downstream | 2126628 | 16181318 ~ 16182303 (+) | False | mustn1a |
| TU34871 | other | downstream | 4720080 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 4762712 | 18817402 ~ 18817475 (+) | True | trnai-aau |
