Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32208 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G27309 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 14555251 ~ 14555465 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32173 | lncRNA | upstream | 58393 | 14496212 ~ 14496858 (+) | True | G27275 |
| TU32167 | lncRNA | upstream | 64115 | 14490780 ~ 14491136 (+) | True | G27269 |
| TU32160 | lncRNA | upstream | 84831 | 14470090 ~ 14470420 (+) | True | G27262 |
| TU32056 | lncRNA | upstream | 383174 | 14169780 ~ 14172077 (+) | True | G27164 |
| TU31779 | lncRNA | upstream | 500561 | 14000931 ~ 14054690 (+) | True | G26921 |
| TU32212 | lncRNA | downstream | 6752 | 14562217 ~ 14604546 (+) | True | G27311 |
| TU32379 | lncRNA | downstream | 236946 | 14792411 ~ 14792622 (+) | True | G27450 |
| XR_004579401.1 | lncRNA | downstream | 258414 | 14813879 ~ 14850121 (+) | True | LOC117598849 |
| XR_004577376.1 | lncRNA | downstream | 321213 | 14876678 ~ 14880424 (+) | True | LOC117596203 |
| TU32642 | lncRNA | downstream | 551492 | 15106957 ~ 15107174 (+) | True | G27679 |
| XM_026922220.2 | mRNA | upstream | 426068 | 14117983 ~ 14129183 (+) | True | LOC113531458 |
| XM_026920665.2 | mRNA | upstream | 441321 | 14100207 ~ 14113930 (+) | True | aldh1l1 |
| XM_026919278.2 | mRNA | downstream | 27862 | 14583327 ~ 14588319 (+) | True | myl9b |
| XM_026919289.2 | mRNA | downstream | 27882 | 14583347 ~ 14588319 (+) | False | myl9b |
| XM_026918825.2 | mRNA | downstream | 171692 | 14727157 ~ 14761927 (+) | True | quo |
| XM_026918833.2 | mRNA | downstream | 171692 | 14727157 ~ 14761927 (+) | False | quo |
| XM_026918841.2 | mRNA | downstream | 171692 | 14727157 ~ 14761927 (+) | False | quo |
| XR_004577012.1 | other | upstream | 1053955 | 13498298 ~ 13501296 (+) | False | tshba |
| XR_004577009.1 | other | upstream | 1055886 | 13495857 ~ 13499365 (+) | False | tshba |
| trnaf-gaa_15 | other | downstream | 636119 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004580083.1 | other | downstream | 723362 | 15278827 ~ 15294354 (+) | False | fancd2 |
| TU33403 | other | downstream | 1625853 | 16181318 ~ 16182303 (+) | False | mustn1a |
| TU34871 | other | downstream | 4219305 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 4261937 | 18817402 ~ 18817475 (+) | True | trnai-aau |
