Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32702 |
| length | 1099 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G27733 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 15276640 ~ 15278716 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32642 | lncRNA | upstream | 169466 | 15106957 ~ 15107174 (+) | True | G27679 |
| XR_004577376.1 | lncRNA | upstream | 396216 | 14876678 ~ 14880424 (+) | True | LOC117596203 |
| XR_004579401.1 | lncRNA | upstream | 426519 | 14813879 ~ 14850121 (+) | True | LOC117598849 |
| TU32379 | lncRNA | upstream | 484018 | 14792411 ~ 14792622 (+) | True | G27450 |
| TU32212 | lncRNA | upstream | 672094 | 14562217 ~ 14604546 (+) | True | G27311 |
| TU32738 | lncRNA | downstream | 192816 | 15471532 ~ 15471756 (+) | True | G27764 |
| TU32743 | lncRNA | downstream | 210820 | 15489536 ~ 15489764 (+) | True | G27769 |
| TU32973 | lncRNA | downstream | 336308 | 15615024 ~ 15616714 (+) | True | G27979 |
| TU33046 | lncRNA | downstream | 495660 | 15774376 ~ 15775849 (+) | True | G28040 |
| TU33047 | lncRNA | downstream | 498182 | 15776898 ~ 15778600 (+) | True | G28041 |
| XM_026913091.2 | mRNA | upstream | 2423 | 15255646 ~ 15274217 (+) | True | usp4 |
| XM_026913120.2 | mRNA | upstream | 21107 | 15249305 ~ 15255533 (+) | False | emc3 |
| XM_026913112.2 | mRNA | upstream | 21107 | 15249306 ~ 15255533 (+) | True | emc3 |
| XM_026926121.2 | mRNA | upstream | 30742 | 15240334 ~ 15245898 (+) | True | sec61a1l |
| XM_026921306.2 | mRNA | upstream | 46188 | 15222690 ~ 15230452 (+) | True | ip6k2a |
| XM_034313516.1 | mRNA | downstream | 106 | 15278822 ~ 15283378 (+) | False | fancd2 |
| XM_034313505.1 | mRNA | downstream | 124 | 15278840 ~ 15304494 (+) | False | fancd2 |
| XM_026917572.2 | mRNA | downstream | 126 | 15278842 ~ 15304494 (+) | True | fancd2 |
| XM_034313514.1 | mRNA | downstream | 12564 | 15291280 ~ 15304494 (+) | False | fancd2 |
| XM_026920001.2 | mRNA | downstream | 30123 | 15308839 ~ 15384094 (+) | True | tex264a |
| trnaf-gaa_15 | other | upstream | 84984 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004577012.1 | other | upstream | 1775344 | 13498298 ~ 13501296 (+) | False | tshba |
| XR_004577009.1 | other | upstream | 1777275 | 13495857 ~ 13499365 (+) | False | tshba |
| XR_004580083.1 | other | downstream | 111 | 15278827 ~ 15294354 (+) | False | fancd2 |
| TU33403 | other | downstream | 902602 | 16181318 ~ 16182303 (+) | False | mustn1a |
| TU34871 | other | downstream | 3496054 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 3538686 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU35395 | other | downstream | 4255725 | 19534441 ~ 19537014 (+) | False | smx5 |
