Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32928 |
| length | 219 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G27935 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 15477790 ~ 15478008 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32925 | lncRNA | downstream | 5243 | 15472341 ~ 15472547 (-) | True | G27932 |
| TU32884 | lncRNA | downstream | 93700 | 15382914 ~ 15384090 (-) | True | G27904 |
| TU32777 | lncRNA | downstream | 231437 | 15244315 ~ 15246353 (-) | True | G27801 |
| TU32670 | lncRNA | downstream | 326741 | 15150812 ~ 15151049 (-) | True | G27706 |
| TU32669 | lncRNA | downstream | 331635 | 15144705 ~ 15146155 (-) | True | G27705 |
| TU32946 | lncRNA | upstream | 25824 | 15503832 ~ 15504043 (-) | True | G27953 |
| TU33196 | lncRNA | upstream | 137017 | 15615025 ~ 15616748 (-) | True | G28173 |
| TU33208 | lncRNA | upstream | 203562 | 15681570 ~ 15682044 (-) | True | G28182 |
| TU33217 | lncRNA | upstream | 242759 | 15720767 ~ 15725456 (-) | True | G28191 |
| TU33234 | lncRNA | upstream | 308845 | 15786853 ~ 15788153 (-) | True | G28207 |
| XM_026919181.2 | mRNA | downstream | 7618 | 15462073 ~ 15470172 (-) | False | oxtr |
| XM_026919171.2 | mRNA | downstream | 7631 | 15462073 ~ 15470159 (-) | False | oxtr |
| XM_026917581.2 | mRNA | downstream | 199077 | 15276905 ~ 15278713 (-) | True | gpx1b |
| XM_026929254.2 | mRNA | downstream | 438187 | 15033446 ~ 15039603 (-) | True | nprl2 |
| XM_034313981.1 | mRNA | downstream | 445289 | 15025127 ~ 15032501 (-) | False | zmynd10 |
| XM_034314047.1 | mRNA | upstream | 27636 | 15505644 ~ 15568428 (-) | False | rad18 |
| XM_034314051.1 | mRNA | upstream | 27636 | 15505644 ~ 15568428 (-) | False | rad18 |
| XM_034314053.1 | mRNA | upstream | 33858 | 15511866 ~ 15568428 (-) | True | rad18 |
| XM_034314042.1 | mRNA | upstream | 47552 | 15525560 ~ 15568428 (-) | False | rad18 |
| XM_026919148.2 | mRNA | upstream | 140343 | 15618351 ~ 15727114 (-) | False | srgap3 |
| TU32920 | other | downstream | 8561 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 16789 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 178771 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403256.2 | other | downstream | 601800 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| TU34409 | other | upstream | 1794947 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 2035704 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 2471149 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 2592979 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 3099216 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
