Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33208 |
| length | 209 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G28182 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 15681570 ~ 15682044 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33196 | lncRNA | downstream | 64822 | 15615025 ~ 15616748 (-) | True | G28173 |
| TU32946 | lncRNA | downstream | 177527 | 15503832 ~ 15504043 (-) | True | G27953 |
| TU32928 | lncRNA | downstream | 203562 | 15477790 ~ 15478008 (-) | True | G27935 |
| TU32925 | lncRNA | downstream | 209023 | 15472341 ~ 15472547 (-) | True | G27932 |
| TU32884 | lncRNA | downstream | 297480 | 15382914 ~ 15384090 (-) | True | G27904 |
| TU33217 | lncRNA | upstream | 38723 | 15720767 ~ 15725456 (-) | True | G28191 |
| TU33234 | lncRNA | upstream | 104809 | 15786853 ~ 15788153 (-) | True | G28207 |
| TU33280 | lncRNA | upstream | 246997 | 15929041 ~ 15933858 (-) | True | G28232 |
| TU33314 | lncRNA | upstream | 353789 | 16035833 ~ 16045675 (-) | True | G28256 |
| TU33316 | lncRNA | upstream | 355939 | 16037983 ~ 16039793 (-) | True | G28258 |
| XM_034314047.1 | mRNA | downstream | 113142 | 15505644 ~ 15568428 (-) | False | rad18 |
| XM_034314051.1 | mRNA | downstream | 113142 | 15505644 ~ 15568428 (-) | False | rad18 |
| XM_034314053.1 | mRNA | downstream | 113142 | 15511866 ~ 15568428 (-) | True | rad18 |
| XM_034314042.1 | mRNA | downstream | 113142 | 15525560 ~ 15568428 (-) | False | rad18 |
| XM_026919171.2 | mRNA | downstream | 211411 | 15462073 ~ 15470159 (-) | False | oxtr |
| XM_026929869.2 | mRNA | upstream | 70169 | 15752213 ~ 15756341 (-) | True | cish |
| XM_026920628.2 | mRNA | upstream | 80492 | 15762536 ~ 15775878 (-) | False | LOC113530515 |
| XM_026920619.2 | mRNA | upstream | 80492 | 15762536 ~ 15775877 (-) | True | LOC113530515 |
| XM_026920638.2 | mRNA | upstream | 80492 | 15762536 ~ 15773526 (-) | False | LOC113530515 |
| XM_026920652.2 | mRNA | upstream | 96146 | 15778190 ~ 15784244 (-) | True | wdr82 |
| TU32920 | other | downstream | 212341 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 220569 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 382551 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403256.2 | other | downstream | 805580 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| TU34409 | other | upstream | 1590911 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 1831668 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 2267113 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 2388943 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 2895180 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
