Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33332 |
| length | 396 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 1 |
| gene id | eif4enif1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 16125830 ~ 16135715 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33349 | lncRNA | downstream | 2955 | 16122729 ~ 16122949 (-) | True | G28278 |
| TU33314 | lncRNA | downstream | 80229 | 16035833 ~ 16045675 (-) | True | G28256 |
| TU33316 | lncRNA | downstream | 86111 | 16037983 ~ 16039793 (-) | True | G28258 |
| TU33280 | lncRNA | downstream | 192046 | 15929041 ~ 15933858 (-) | True | G28232 |
| TU33234 | lncRNA | downstream | 337751 | 15786853 ~ 15788153 (-) | True | G28207 |
| TU33409 | lncRNA | upstream | 54776 | 16181075 ~ 16181718 (-) | True | G28325 |
| TU33415 | lncRNA | upstream | 70275 | 16196574 ~ 16196867 (-) | True | G28331 |
| TU33464 | lncRNA | upstream | 132559 | 16258858 ~ 16259163 (-) | True | G28376 |
| TU33463 | lncRNA | upstream | 133137 | 16259436 ~ 16260312 (-) | True | G28375 |
| TU33471 | lncRNA | upstream | 137315 | 16263614 ~ 16264242 (-) | True | G28383 |
| XM_026916183.2 | mRNA | downstream | 6056 | 16106829 ~ 16119848 (-) | False | patz1 |
| XM_026916175.2 | mRNA | downstream | 6056 | 16106829 ~ 16119848 (-) | True | patz1 |
| XM_026916190.2 | mRNA | downstream | 6057 | 16106829 ~ 16119847 (-) | False | patz1 |
| XM_026924815.2 | mRNA | downstream | 42126 | 16074046 ~ 16083778 (-) | False | tgfa |
| XM_026924805.2 | mRNA | downstream | 42128 | 16074046 ~ 16083776 (-) | True | tgfa |
| XM_026931602.2 | mRNA | upstream | 46371 | 16172670 ~ 16175112 (-) | True | c2h1orf74 |
| XM_026922252.2 | mRNA | upstream | 56218 | 16182517 ~ 16187880 (-) | True | ruvbl1 |
| XM_034311370.1 | mRNA | upstream | 76089 | 16202388 ~ 16209962 (-) | False | gata2b |
| XM_026917189.2 | mRNA | upstream | 76089 | 16202388 ~ 16209962 (-) | True | gata2b |
| XM_026927104.2 | mRNA | upstream | 94866 | 16221165 ~ 16225200 (-) | True | si:ch211-157b11.8 |
| TU32920 | other | downstream | 656675 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 664903 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 826885 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403256.2 | other | downstream | 1249914 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| TU34409 | other | upstream | 1146656 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 1387413 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 1822858 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 1944688 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 2450925 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
