Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33449 |
| length | 844 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G28361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 16268709 ~ 16269552 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33361 | lncRNA | upstream | 113465 | 16154986 ~ 16155244 (+) | True | G28287 |
| TU33182 | lncRNA | upstream | 145569 | 16122896 ~ 16123140 (+) | True | G28162 |
| TU33180 | lncRNA | upstream | 146377 | 16121977 ~ 16122332 (+) | True | G28160 |
| TU33176 | lncRNA | upstream | 162437 | 16106043 ~ 16106272 (+) | True | G28156 |
| TU33170 | lncRNA | upstream | 183741 | 16083289 ~ 16084968 (+) | False | slc2a11a |
| TU33490 | lncRNA | downstream | 63899 | 16333451 ~ 16334652 (+) | True | G28402 |
| TU33492 | lncRNA | downstream | 66640 | 16336192 ~ 16336694 (+) | True | G28404 |
| TU33493 | lncRNA | downstream | 76093 | 16345645 ~ 16346086 (+) | True | G28405 |
| TU33501 | lncRNA | downstream | 88530 | 16358082 ~ 16361347 (+) | True | G28410 |
| TU33523 | lncRNA | downstream | 128693 | 16398245 ~ 16401066 (+) | True | tomm6 |
| XM_026924123.2 | mRNA | upstream | 130 | 16259432 ~ 16268579 (+) | True | p4htm |
| XM_026924135.2 | mRNA | upstream | 10278 | 16245307 ~ 16258431 (+) | True | myhb |
| XM_026929639.2 | mRNA | upstream | 28767 | 16234025 ~ 16239942 (+) | True | arpc4 |
| XM_026919974.2 | mRNA | upstream | 35371 | 16231892 ~ 16233338 (+) | True | LOC113530143 |
| XM_026916248.2 | mRNA | upstream | 37927 | 16227005 ~ 16230782 (+) | True | LOC113527941 |
| XM_026928817.2 | mRNA | downstream | 14401 | 16283953 ~ 16288642 (+) | True | kbtbd12 |
| XM_026927266.2 | mRNA | downstream | 31716 | 16301268 ~ 16302456 (+) | True | akap14 |
| XM_026931267.2 | mRNA | downstream | 36509 | 16306061 ~ 16313244 (+) | False | c2h1orf159 |
| XM_034310280.1 | mRNA | downstream | 36551 | 16306103 ~ 16313244 (+) | False | c2h1orf159 |
| XM_026931429.2 | mRNA | downstream | 36588 | 16306140 ~ 16313244 (+) | True | c2h1orf159 |
| TU33403 | other | upstream | 86406 | 16181318 ~ 16182303 (+) | False | mustn1a |
| XR_004580083.1 | other | upstream | 974355 | 15278827 ~ 15294354 (+) | False | fancd2 |
| trnaf-gaa_15 | other | upstream | 1077053 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004577012.1 | other | upstream | 2767413 | 13498298 ~ 13501296 (+) | False | tshba |
| XR_004577010.1 | other | upstream | 2769344 | 13496082 ~ 13499365 (+) | False | tshba |
| TU34871 | other | downstream | 2505218 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 2547850 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU35395 | other | downstream | 3264889 | 19534441 ~ 19537014 (+) | False | smx5 |
| XR_003403752.1 | other | downstream | 3840578 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU36319 | other | downstream | 4745306 | 21014858 ~ 21017447 (+) | False | insl5a |
