Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33473 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G28385 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 16266556 ~ 16266755 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33472 | lncRNA | downstream | 1396 | 16264924 ~ 16265160 (-) | True | G28384 |
| TU33471 | lncRNA | downstream | 2314 | 16263614 ~ 16264242 (-) | True | G28383 |
| TU33463 | lncRNA | downstream | 6244 | 16259436 ~ 16260312 (-) | True | G28375 |
| TU33464 | lncRNA | downstream | 7393 | 16258858 ~ 16259163 (-) | True | G28376 |
| TU33415 | lncRNA | downstream | 69689 | 16196574 ~ 16196867 (-) | True | G28331 |
| TU33633 | lncRNA | upstream | 62353 | 16329108 ~ 16329421 (-) | True | G28515 |
| TU33626 | lncRNA | upstream | 91384 | 16358139 ~ 16359521 (-) | True | G28508 |
| TU33656 | lncRNA | upstream | 195347 | 16462102 ~ 16463933 (-) | True | G28537 |
| TU33657 | lncRNA | upstream | 195347 | 16462102 ~ 16489915 (-) | False | G28537 |
| TU33936 | lncRNA | upstream | 304035 | 16570790 ~ 16571524 (-) | True | G28779 |
| XM_026927104.2 | mRNA | downstream | 41356 | 16221165 ~ 16225200 (-) | True | si:ch211-157b11.8 |
| XM_034311370.1 | mRNA | downstream | 56594 | 16202388 ~ 16209962 (-) | False | gata2b |
| XM_026917189.2 | mRNA | downstream | 56594 | 16202388 ~ 16209962 (-) | True | gata2b |
| XM_026922252.2 | mRNA | downstream | 78676 | 16182517 ~ 16187880 (-) | True | ruvbl1 |
| XM_026931602.2 | mRNA | downstream | 91444 | 16172670 ~ 16175112 (-) | True | c2h1orf74 |
| XM_034299722.1 | mRNA | upstream | 5113 | 16271868 ~ 16281761 (-) | True | slc26a6l |
| XM_034300126.1 | mRNA | upstream | 21416 | 16288171 ~ 16299906 (-) | False | iho1 |
| XM_034300121.1 | mRNA | upstream | 21416 | 16288171 ~ 16299905 (-) | True | iho1 |
| XM_026928839.2 | mRNA | upstream | 21416 | 16288171 ~ 16296013 (-) | False | iho1 |
| XM_034300109.1 | mRNA | upstream | 21416 | 16288171 ~ 16296013 (-) | False | iho1 |
| TU32920 | other | downstream | 797327 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 805555 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 967537 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403256.2 | other | downstream | 1390566 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| TU34409 | other | upstream | 1006200 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 1246957 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 1682402 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 1804232 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 2310469 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
