Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33501 |
| length | 363 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G28410 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 16358082 ~ 16361347 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33493 | lncRNA | upstream | 11996 | 16345645 ~ 16346086 (+) | True | G28405 |
| TU33492 | lncRNA | upstream | 21388 | 16336192 ~ 16336694 (+) | True | G28404 |
| TU33490 | lncRNA | upstream | 23430 | 16333451 ~ 16334652 (+) | True | G28402 |
| TU33449 | lncRNA | upstream | 88530 | 16268709 ~ 16269552 (+) | True | G28361 |
| TU33361 | lncRNA | upstream | 202838 | 16154986 ~ 16155244 (+) | True | G28287 |
| TU33523 | lncRNA | downstream | 36898 | 16398245 ~ 16401066 (+) | True | tomm6 |
| TU33518 | lncRNA | downstream | 37083 | 16398430 ~ 16401066 (+) | False | tomm6 |
| TU33519 | lncRNA | downstream | 37083 | 16398430 ~ 16401066 (+) | False | tomm6 |
| TU33520 | lncRNA | downstream | 37083 | 16398430 ~ 16401111 (+) | False | tomm6 |
| TU33525 | lncRNA | downstream | 37083 | 16398430 ~ 16401111 (+) | False | tomm6 |
| XM_026915498.2 | mRNA | upstream | 29930 | 16321000 ~ 16328152 (+) | True | si:ch211-157b11.14 |
| XM_026915510.2 | mRNA | upstream | 37510 | 16317108 ~ 16320572 (+) | True | LOC113527565 |
| XM_026931267.2 | mRNA | upstream | 44838 | 16306061 ~ 16313244 (+) | False | c2h1orf159 |
| XM_026924529.2 | mRNA | downstream | 2324 | 16363671 ~ 16365937 (+) | True | ppil1 |
| XM_026938484.2 | mRNA | downstream | 30065 | 16391412 ~ 16394007 (+) | True | tspo |
| XM_026938572.2 | mRNA | downstream | 30068 | 16391415 ~ 16394007 (+) | False | tspo |
| XM_026938693.2 | mRNA | downstream | 37062 | 16398409 ~ 16401099 (+) | False | tomm6 |
| XM_026943326.2 | mRNA | downstream | 99054 | 16460401 ~ 16463536 (+) | True | LOC113544464 |
| TU33403 | other | upstream | 175779 | 16181318 ~ 16182303 (+) | False | mustn1a |
| XR_004580083.1 | other | upstream | 1063728 | 15278827 ~ 15294354 (+) | False | fancd2 |
| trnaf-gaa_15 | other | upstream | 1166426 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004577012.1 | other | upstream | 2856786 | 13498298 ~ 13501296 (+) | False | tshba |
| XR_004577013.1 | other | upstream | 2858717 | 13496154 ~ 13499365 (+) | False | tshba |
| TU34871 | other | downstream | 2413423 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 2456055 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU35395 | other | downstream | 3173094 | 19534441 ~ 19537014 (+) | False | smx5 |
| XR_003403752.1 | other | downstream | 3748783 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU36319 | other | downstream | 4653511 | 21014858 ~ 21017447 (+) | False | insl5a |
