Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33656 |
| length | 786 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G28537 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 16462102 ~ 16489915 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33626 | lncRNA | downstream | 102581 | 16358139 ~ 16359521 (-) | True | G28508 |
| TU33633 | lncRNA | downstream | 132681 | 16329108 ~ 16329421 (-) | True | G28515 |
| TU33473 | lncRNA | downstream | 195347 | 16266556 ~ 16266755 (-) | True | G28385 |
| TU33472 | lncRNA | downstream | 196942 | 16264924 ~ 16265160 (-) | True | G28384 |
| TU33471 | lncRNA | downstream | 197860 | 16263614 ~ 16264242 (-) | True | G28383 |
| TU33936 | lncRNA | upstream | 106857 | 16570790 ~ 16571524 (-) | True | G28779 |
| TU34351 | lncRNA | upstream | 590155 | 17054088 ~ 17054656 (-) | True | G29119 |
| TU34418 | lncRNA | upstream | 929525 | 17393458 ~ 17394467 (-) | True | G29167 |
| TU34417 | lncRNA | upstream | 930833 | 17394766 ~ 17396199 (-) | True | G29166 |
| TU34423 | lncRNA | upstream | 959938 | 17423871 ~ 17429778 (-) | True | LOC113528975 |
| XM_034298008.1 | mRNA | downstream | 7536 | 16436840 ~ 16454566 (-) | True | LOC113531657 |
| XM_026927117.2 | mRNA | downstream | 32006 | 16419260 ~ 16430096 (-) | True | prkcda |
| XM_026938056.2 | mRNA | downstream | 45283 | 16406576 ~ 16416819 (-) | True | ddi2 |
| XM_026938137.2 | mRNA | downstream | 45283 | 16409528 ~ 16416819 (-) | False | ddi2 |
| XM_034310450.1 | mRNA | downstream | 55620 | 16400949 ~ 16406482 (-) | False | si:ch73-15b2.5 |
| XM_034310370.1 | mRNA | upstream | 12492 | 16476425 ~ 16488929 (-) | True | rad54l |
| XM_026909859.2 | mRNA | upstream | 27748 | 16491681 ~ 16519158 (-) | True | LOC113523777 |
| XM_034312439.1 | mRNA | upstream | 70835 | 16534768 ~ 16586246 (-) | False | st3gal3a |
| XM_034312444.1 | mRNA | upstream | 70835 | 16534768 ~ 16586244 (-) | False | st3gal3a |
| XM_026913599.2 | mRNA | upstream | 70835 | 16534768 ~ 16586244 (-) | True | st3gal3a |
| TU32920 | other | downstream | 992873 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU32916 | other | downstream | 1001101 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32819 | other | downstream | 1163083 | 15297309 ~ 15299019 (-) | True | G27843 |
| XR_003403256.2 | other | downstream | 1586112 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| TU34409 | other | upstream | 809022 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 1049779 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
| TU34529 | other | upstream | 1485224 | 17949157 ~ 17949718 (-) | True | G29263 |
| TU34546 | other | upstream | 1607054 | 18070987 ~ 18072909 (-) | True | G29279 |
| trnae-cuc_6 | other | upstream | 2113291 | 18577224 ~ 18577295 (-) | True | trnae-cuc_6 |
