Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU34993 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G29641 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 19050824 ~ 19051043 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34992 | lncRNA | upstream | 386 | 19050226 ~ 19050438 (+) | True | G29640 |
| TU34910 | lncRNA | upstream | 102310 | 18933601 ~ 18948514 (+) | False | boka |
| TU34870 | lncRNA | upstream | 215103 | 18818725 ~ 18835721 (+) | True | G29569 |
| TU34849 | lncRNA | upstream | 359817 | 18688653 ~ 18691007 (+) | True | G29561 |
| XR_003403164.2 | lncRNA | upstream | 583504 | 18464884 ~ 18467320 (+) | False | LOC113530672 |
| TU35001 | lncRNA | downstream | 34881 | 19085924 ~ 19086161 (+) | False | LOC113533886 |
| TU35002 | lncRNA | downstream | 35415 | 19086458 ~ 19086693 (+) | False | LOC113533886 |
| TU35019 | lncRNA | downstream | 141506 | 19192549 ~ 19195409 (+) | True | G29656 |
| TU35041 | lncRNA | downstream | 149272 | 19200315 ~ 19202099 (+) | True | G29674 |
| TU35172 | lncRNA | downstream | 208005 | 19259048 ~ 19259266 (+) | True | G29792 |
| XM_026914107.2 | mRNA | upstream | 1074 | 18988005 ~ 19049750 (+) | False | kif1aa |
| XM_026939069.2 | mRNA | downstream | 1079 | 19052122 ~ 19060672 (+) | True | scly |
| XM_026939015.2 | mRNA | downstream | 2089 | 19053132 ~ 19060672 (+) | False | scly |
| XM_026938931.2 | mRNA | downstream | 2235 | 19053278 ~ 19060672 (+) | False | scly |
| XM_026939139.2 | mRNA | downstream | 2367 | 19053410 ~ 19060672 (+) | False | scly |
| XM_026926326.2 | mRNA | downstream | 10054 | 19061097 ~ 19087211 (+) | True | LOC113533886 |
| TU34871 | other | upstream | 223904 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | upstream | 233349 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU33403 | other | upstream | 2868521 | 16181318 ~ 16182303 (+) | False | mustn1a |
| XR_004580083.1 | other | upstream | 3756470 | 15278827 ~ 15294354 (+) | False | fancd2 |
| trnaf-gaa_15 | other | upstream | 3859168 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| TU35395 | other | downstream | 483398 | 19534441 ~ 19537014 (+) | False | smx5 |
| XR_003403752.1 | other | downstream | 1059087 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU36319 | other | downstream | 1963815 | 21014858 ~ 21017447 (+) | False | insl5a |
| XR_004579462.1 | other | downstream | 3547298 | 22598341 ~ 22602338 (+) | False | tmem69 |
| trnaf-gaa_16 | other | downstream | 4424908 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
