Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU35911 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G30422 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 20247111 ~ 20247337 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35910 | lncRNA | downstream | 240 | 20246605 ~ 20246871 (-) | True | G30421 |
| TU35898 | lncRNA | downstream | 39379 | 20199533 ~ 20207732 (-) | True | G30412 |
| XR_004579569.1 | lncRNA | downstream | 47595 | 20197220 ~ 20199516 (-) | True | LOC117599142 |
| TU35799 | lncRNA | downstream | 134593 | 20104252 ~ 20112518 (-) | True | G30320 |
| TU35741 | lncRNA | downstream | 233106 | 20012425 ~ 20014005 (-) | False | glmnb |
| TU35912 | lncRNA | upstream | 829 | 20248166 ~ 20248509 (-) | True | G30423 |
| TU35920 | lncRNA | upstream | 67501 | 20314838 ~ 20315511 (-) | True | G30428 |
| TU35992 | lncRNA | upstream | 112504 | 20359841 ~ 20360828 (-) | False | pex5la |
| TU36004 | lncRNA | upstream | 156872 | 20404209 ~ 20404408 (-) | True | G30507 |
| TU36047 | lncRNA | upstream | 232775 | 20480112 ~ 20480726 (-) | True | G30550 |
| XM_034311036.1 | mRNA | downstream | 1103 | 20207755 ~ 20246008 (-) | False | nme7 |
| XM_026923896.2 | mRNA | downstream | 1103 | 20207755 ~ 20246008 (-) | False | nme7 |
| XM_026923886.2 | mRNA | downstream | 1103 | 20207755 ~ 20246008 (-) | False | nme7 |
| XM_034311031.1 | mRNA | downstream | 1103 | 20221740 ~ 20246008 (-) | True | nme7 |
| XM_026923691.2 | mRNA | downstream | 63817 | 20172128 ~ 20183294 (-) | True | dpt |
| XM_026926703.2 | mRNA | upstream | 2778 | 20250115 ~ 20258553 (-) | False | LOC113534100 |
| XM_034311024.1 | mRNA | upstream | 2778 | 20250115 ~ 20258553 (-) | True | LOC113534100 |
| XM_026943439.2 | mRNA | upstream | 17976 | 20265313 ~ 20310226 (-) | True | tmem131 |
| XM_026927143.2 | mRNA | upstream | 77521 | 20324858 ~ 20328459 (-) | True | mrpl47 |
| XM_026917435.2 | mRNA | upstream | 112385 | 20359722 ~ 20429325 (-) | False | pex5la |
| trnap-cgg_1 | other | downstream | 860598 | 19386442 ~ 19386513 (-) | True | trnap-cgg_1 |
| trnap-ugg_1 | other | downstream | 866599 | 19380441 ~ 19380512 (-) | True | trnap-ugg_1 |
| trnap-ugg | other | downstream | 1429913 | 18817127 ~ 18817198 (-) | True | trnap-ugg |
| trnag-ucc | other | downstream | 1430781 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
| TU34886 | other | downstream | 1440361 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| XR_004580158.1 | other | upstream | 1216524 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580163.1 | other | upstream | 1216524 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580160.1 | other | upstream | 1216524 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580156.1 | other | upstream | 1216524 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580159.1 | other | upstream | 1216524 | 21463861 ~ 21531428 (-) | False | raver2 |
