Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU36040 |
| length | 599 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G30543 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 20505039 ~ 20505637 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36033 | lncRNA | upstream | 17829 | 20484465 ~ 20487210 (+) | True | G30536 |
| XR_003403507.2 | lncRNA | upstream | 20661 | 20480974 ~ 20484378 (+) | True | LOC113534552 |
| TU35983 | lncRNA | upstream | 75790 | 20428913 ~ 20429249 (+) | True | G30489 |
| TU35979 | lncRNA | upstream | 81106 | 20423727 ~ 20423933 (+) | True | G30485 |
| TU35960 | lncRNA | upstream | 100484 | 20404351 ~ 20404555 (+) | True | G30467 |
| TU36042 | lncRNA | downstream | 686 | 20506323 ~ 20506646 (+) | True | G30545 |
| TU36067 | lncRNA | downstream | 70325 | 20575962 ~ 20658080 (+) | False | dlg1 |
| TU36141 | lncRNA | downstream | 174763 | 20680400 ~ 20680770 (+) | True | G30620 |
| XR_004579663.1 | lncRNA | downstream | 264918 | 20770555 ~ 20781908 (+) | False | LOC117599214 |
| XR_004579661.1 | lncRNA | downstream | 264958 | 20770595 ~ 20781908 (+) | True | LOC117599214 |
| XM_026927440.2 | mRNA | upstream | 24965 | 20473271 ~ 20480074 (+) | True | phb2b |
| XM_026936757.2 | mRNA | upstream | 32974 | 20467149 ~ 20472065 (+) | True | pde6d |
| XM_026917393.2 | mRNA | upstream | 145388 | 20335632 ~ 20359651 (+) | False | usp13 |
| XM_026927339.2 | mRNA | downstream | 7152 | 20512789 ~ 20516555 (+) | True | ptmaa |
| XM_034310591.1 | mRNA | downstream | 31336 | 20536973 ~ 20655752 (+) | True | dlg1 |
| XM_026916910.2 | mRNA | downstream | 31336 | 20536973 ~ 20655752 (+) | False | dlg1 |
| XM_026916919.2 | mRNA | downstream | 31336 | 20536973 ~ 20655752 (+) | False | dlg1 |
| XM_026916934.2 | mRNA | downstream | 31338 | 20536975 ~ 20655752 (+) | False | dlg1 |
| XR_003403752.1 | other | upstream | 394814 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU35395 | other | upstream | 968025 | 19534441 ~ 19537014 (+) | False | smx5 |
| TU34871 | other | upstream | 1678119 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | upstream | 1687564 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU33403 | other | upstream | 4322736 | 16181318 ~ 16182303 (+) | False | mustn1a |
| TU36319 | other | downstream | 509221 | 21014858 ~ 21017447 (+) | False | insl5a |
| XR_004579462.1 | other | downstream | 2092704 | 22598341 ~ 22602338 (+) | False | tmem69 |
| trnaf-gaa_16 | other | downstream | 2970314 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
| TU38551 | other | downstream | 3514741 | 24020378 ~ 24021036 (+) | True | G32684 |
| TU38758 | other | downstream | 4147353 | 24652990 ~ 24653965 (+) | False | LOC117598985 |
