Item | Value |
---|---|
RNA id | TU36280 |
length | 210 |
lncRNA type | inter_gene |
GC content | 0.38 |
exon number | 1 |
gene id | G30747 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047596.1 |
NCBI id | CM018542.1 |
chromosome length | 35203048 |
location | 20963432 ~ 20963641 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU36246 | lncRNA | upstream | 73722 | 20835487 ~ 20889710 (+) | True | G30715 |
TU36252 | lncRNA | upstream | 111756 | 20848491 ~ 20851676 (+) | True | G30721 |
XR_004579663.1 | lncRNA | upstream | 181524 | 20770555 ~ 20781908 (+) | False | LOC117599214 |
XR_004579661.1 | lncRNA | upstream | 181524 | 20770595 ~ 20781908 (+) | True | LOC117599214 |
XR_004579662.1 | lncRNA | upstream | 181524 | 20770595 ~ 20781908 (+) | False | LOC117599214 |
TU36341 | lncRNA | downstream | 129973 | 21093614 ~ 21093816 (+) | True | G30791 |
TU36879 | lncRNA | downstream | 421365 | 21385006 ~ 21385342 (+) | True | G31260 |
XR_004580180.1 | lncRNA | downstream | 438601 | 21402242 ~ 21406386 (+) | True | LOC113526220 |
XR_003402742.2 | lncRNA | downstream | 439832 | 21403473 ~ 21406386 (+) | False | LOC113526220 |
TU37020 | lncRNA | downstream | 645592 | 21609233 ~ 21612878 (+) | True | G31384 |
XM_034314801.1 | mRNA | upstream | 14795 | 20894023 ~ 20948637 (+) | False | wwc3 |
XM_034314792.1 | mRNA | upstream | 14795 | 20894024 ~ 20948637 (+) | True | wwc3 |
XM_034314817.1 | mRNA | upstream | 14795 | 20894024 ~ 20948637 (+) | False | wwc3 |
XM_034314798.1 | mRNA | upstream | 14795 | 20894025 ~ 20948637 (+) | False | wwc3 |
XM_034314804.1 | mRNA | upstream | 14795 | 20894025 ~ 20948637 (+) | False | wwc3 |
XM_026913045.2 | mRNA | downstream | 18891 | 20982532 ~ 20988867 (+) | True | ttc22 |
XM_026918107.2 | mRNA | downstream | 35842 | 20999483 ~ 21011730 (+) | True | wdr78 |
XM_026918093.2 | mRNA | downstream | 51197 | 21014838 ~ 21017867 (+) | True | insl5a |
XM_026923022.2 | mRNA | downstream | 445113 | 21408754 ~ 21448083 (+) | True | jak1 |
XM_026923012.2 | mRNA | downstream | 445113 | 21408754 ~ 21448083 (+) | False | jak1 |
XR_003403752.1 | other | upstream | 853207 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
TU35395 | other | upstream | 1426418 | 19534441 ~ 19537014 (+) | False | smx5 |
TU34871 | other | upstream | 2136512 | 18774770 ~ 18826920 (+) | False | G29569 |
trnai-aau | other | upstream | 2145957 | 18817402 ~ 18817475 (+) | True | trnai-aau |
TU33403 | other | upstream | 4781129 | 16181318 ~ 16182303 (+) | False | mustn1a |
TU36319 | other | downstream | 51217 | 21014858 ~ 21017447 (+) | False | insl5a |
XR_004579462.1 | other | downstream | 1634700 | 22598341 ~ 22602338 (+) | False | tmem69 |
trnaf-gaa_16 | other | downstream | 2512310 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
TU38551 | other | downstream | 3056737 | 24020378 ~ 24021036 (+) | True | G32684 |
TU38758 | other | downstream | 3689349 | 24652990 ~ 24653965 (+) | False | LOC117598985 |