Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU36669 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G31070 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 20960172 ~ 20960391 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36467 | lncRNA | downstream | 302789 | 20655352 ~ 20657383 (-) | True | G30899 |
| TU36466 | lncRNA | downstream | 303652 | 20575961 ~ 20656520 (-) | False | G30899 |
| TU36446 | lncRNA | downstream | 411535 | 20512732 ~ 20548637 (-) | False | G30879 |
| TU36444 | lncRNA | downstream | 426051 | 20512732 ~ 20534121 (-) | True | G30879 |
| TU36445 | lncRNA | downstream | 441225 | 20507382 ~ 20518947 (-) | False | G30879 |
| TU36702 | lncRNA | upstream | 102503 | 21062894 ~ 21065738 (-) | True | G31094 |
| TU36880 | lncRNA | upstream | 320973 | 21281364 ~ 21283225 (-) | False | lepr |
| TU36922 | lncRNA | upstream | 424018 | 21384409 ~ 21385276 (-) | True | G31298 |
| TU37101 | lncRNA | upstream | 429086 | 21389477 ~ 21412173 (-) | True | G31454 |
| TU37132 | lncRNA | upstream | 571857 | 21532248 ~ 21532459 (-) | True | G31481 |
| XM_026935299.2 | mRNA | downstream | 73339 | 20884525 ~ 20886833 (-) | True | zgc:153311 |
| XM_034311575.1 | mRNA | downstream | 145352 | 20683547 ~ 20814820 (-) | False | lrrc7 |
| XM_034311566.1 | mRNA | downstream | 145352 | 20683547 ~ 20814820 (-) | True | lrrc7 |
| XM_026921598.2 | mRNA | downstream | 189761 | 20683547 ~ 20770411 (-) | False | lrrc7 |
| XM_026921363.2 | mRNA | downstream | 189761 | 20683547 ~ 20770411 (-) | False | lrrc7 |
| XM_026928304.2 | mRNA | upstream | 2998 | 20963389 ~ 20978637 (-) | True | lurap1 |
| XM_026918081.2 | mRNA | upstream | 29294 | 20989685 ~ 20994441 (-) | True | ttc4 |
| XM_026918070.2 | mRNA | upstream | 35697 | 20996088 ~ 20999389 (-) | True | pars2 |
| XM_026918061.2 | mRNA | upstream | 35697 | 20996088 ~ 20999388 (-) | False | pars2 |
| XM_034313472.1 | mRNA | upstream | 57535 | 21017926 ~ 21084763 (-) | False | sgip1a |
| trnap-cgg_1 | other | downstream | 1573659 | 19386442 ~ 19386513 (-) | True | trnap-cgg_1 |
| trnap-ugg_1 | other | downstream | 1579660 | 19380441 ~ 19380512 (-) | True | trnap-ugg_1 |
| trnap-ugg | other | downstream | 2142974 | 18817127 ~ 18817198 (-) | True | trnap-ugg |
| trnag-ucc | other | downstream | 2143842 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
| TU34886 | other | downstream | 2153422 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| XR_004580158.1 | other | upstream | 503470 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580163.1 | other | upstream | 503470 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580160.1 | other | upstream | 503470 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580156.1 | other | upstream | 503470 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580159.1 | other | upstream | 503470 | 21463861 ~ 21531428 (-) | False | raver2 |
