Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU36922 |
| length | 868 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G31298 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 21384409 ~ 21385276 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36880 | lncRNA | downstream | 101184 | 21281364 ~ 21283225 (-) | False | lepr |
| TU36702 | lncRNA | downstream | 318671 | 21062894 ~ 21065738 (-) | True | G31094 |
| TU36669 | lncRNA | downstream | 424018 | 20960172 ~ 20960391 (-) | True | G31070 |
| TU36467 | lncRNA | downstream | 727026 | 20655352 ~ 20657383 (-) | True | G30899 |
| TU36466 | lncRNA | downstream | 727889 | 20575961 ~ 20656520 (-) | False | G30899 |
| TU37101 | lncRNA | upstream | 4201 | 21389477 ~ 21412173 (-) | True | G31454 |
| TU37132 | lncRNA | upstream | 146972 | 21532248 ~ 21532459 (-) | True | G31481 |
| TU37138 | lncRNA | upstream | 184580 | 21569856 ~ 21612822 (-) | True | G31486 |
| TU37141 | lncRNA | upstream | 217268 | 21602544 ~ 21603863 (-) | True | G31489 |
| TU37143 | lncRNA | upstream | 222120 | 21607396 ~ 21609167 (-) | True | G31491 |
| XM_026930465.2 | mRNA | downstream | 5635 | 21342709 ~ 21378774 (-) | False | dnajc6 |
| XM_026930457.2 | mRNA | downstream | 5635 | 21342709 ~ 21378774 (-) | True | dnajc6 |
| XM_034314869.1 | mRNA | downstream | 6097 | 21342709 ~ 21378312 (-) | False | dnajc6 |
| XM_026930474.2 | mRNA | downstream | 6097 | 21342709 ~ 21378312 (-) | False | dnajc6 |
| XM_034310139.1 | mRNA | downstream | 66586 | 21283025 ~ 21317823 (-) | True | lepr |
| XM_026930493.2 | mRNA | upstream | 1634 | 21386910 ~ 21400928 (-) | True | ak4 |
| XM_026930484.2 | mRNA | upstream | 1634 | 21386910 ~ 21400927 (-) | False | ak4 |
| XM_026919886.2 | mRNA | upstream | 64270 | 21449546 ~ 21531427 (-) | True | raver2 |
| XM_034298204.1 | mRNA | upstream | 153723 | 21538999 ~ 21579079 (-) | True | cachd1 |
| XM_026922851.2 | mRNA | upstream | 249291 | 21634567 ~ 21756087 (-) | True | ror1 |
| trnap-cgg_1 | other | downstream | 1997896 | 19386442 ~ 19386513 (-) | True | trnap-cgg_1 |
| trnap-ugg_1 | other | downstream | 2003897 | 19380441 ~ 19380512 (-) | True | trnap-ugg_1 |
| trnap-ugg | other | downstream | 2567211 | 18817127 ~ 18817198 (-) | True | trnap-ugg |
| trnag-ucc | other | downstream | 2568079 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
| TU34886 | other | downstream | 2577659 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| XR_004580158.1 | other | upstream | 78585 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580163.1 | other | upstream | 78585 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580160.1 | other | upstream | 78585 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580156.1 | other | upstream | 78585 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580159.1 | other | upstream | 78585 | 21463861 ~ 21531428 (-) | False | raver2 |
