Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37138 |
| length | 648 |
| lncRNA type | sense_over |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G31486 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 21569856 ~ 21612822 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37132 | lncRNA | downstream | 37397 | 21532248 ~ 21532459 (-) | True | G31481 |
| TU37101 | lncRNA | downstream | 157683 | 21389477 ~ 21412173 (-) | True | G31454 |
| TU36922 | lncRNA | downstream | 184580 | 21384409 ~ 21385276 (-) | True | G31298 |
| TU36880 | lncRNA | downstream | 286631 | 21281364 ~ 21283225 (-) | False | lepr |
| TU36702 | lncRNA | downstream | 504118 | 21062894 ~ 21065738 (-) | True | G31094 |
| TU37144 | lncRNA | upstream | 2499 | 21615321 ~ 21615675 (-) | True | G31492 |
| TU37369 | lncRNA | upstream | 491376 | 22104198 ~ 22104411 (-) | True | G31681 |
| XR_004577195.1 | lncRNA | upstream | 517603 | 22130425 ~ 22132698 (-) | True | LOC117596032 |
| XR_004579711.1 | lncRNA | upstream | 560529 | 22173351 ~ 22175740 (-) | True | LOC117599244 |
| XR_004579710.1 | lncRNA | upstream | 583772 | 22196594 ~ 22197668 (-) | True | LOC117599242 |
| XM_026919886.2 | mRNA | downstream | 38429 | 21449546 ~ 21531427 (-) | True | raver2 |
| XM_026930493.2 | mRNA | downstream | 168928 | 21386910 ~ 21400928 (-) | True | ak4 |
| XM_026930484.2 | mRNA | downstream | 168929 | 21386910 ~ 21400927 (-) | False | ak4 |
| XM_034314869.1 | mRNA | downstream | 191544 | 21342709 ~ 21378312 (-) | False | dnajc6 |
| XM_026922851.2 | mRNA | upstream | 21745 | 21634567 ~ 21756087 (-) | True | ror1 |
| XM_026928315.2 | mRNA | upstream | 152093 | 21764915 ~ 21777950 (-) | True | pgm1 |
| XM_026921318.2 | mRNA | upstream | 183738 | 21796560 ~ 21815679 (-) | True | alg6 |
| XM_026923416.2 | mRNA | upstream | 209920 | 21822742 ~ 21825474 (-) | True | foxd3 |
| XM_026927983.2 | mRNA | upstream | 344713 | 21957535 ~ 21968209 (-) | True | atg4c |
| XR_004580163.1 | other | downstream | 38428 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 2003335 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 4287908 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 4468327 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 5018007 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 5027011 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
