Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37433 |
| length | 274 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G31742 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 22224385 ~ 22226660 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579710.1 | lncRNA | downstream | 26717 | 22196594 ~ 22197668 (-) | True | LOC117599242 |
| XR_004579711.1 | lncRNA | downstream | 48645 | 22173351 ~ 22175740 (-) | True | LOC117599244 |
| XR_004577195.1 | lncRNA | downstream | 91687 | 22130425 ~ 22132698 (-) | True | LOC117596032 |
| TU37369 | lncRNA | downstream | 119974 | 22104198 ~ 22104411 (-) | True | G31681 |
| TU37144 | lncRNA | downstream | 608710 | 21615321 ~ 21615675 (-) | True | G31492 |
| TU37446 | lncRNA | upstream | 89146 | 22315806 ~ 22316006 (-) | True | G31755 |
| TU37625 | lncRNA | upstream | 311663 | 22538323 ~ 22560608 (-) | True | G31916 |
| TU37647 | lncRNA | upstream | 338632 | 22565292 ~ 22568836 (-) | True | G31934 |
| TU37648 | lncRNA | upstream | 338632 | 22565292 ~ 22568836 (-) | False | G31934 |
| TU37658 | lncRNA | upstream | 350971 | 22577631 ~ 22577835 (-) | False | ccdc17 |
| XM_034314538.1 | mRNA | downstream | 24751 | 22157708 ~ 22199634 (-) | True | LOC117599932 |
| XM_034314533.1 | mRNA | downstream | 74147 | 22144203 ~ 22150238 (-) | True | LOC113538524 |
| XM_026916634.2 | mRNA | downstream | 177927 | 22035213 ~ 22046458 (-) | True | usp1 |
| XM_026916626.2 | mRNA | downstream | 178189 | 22035213 ~ 22046196 (-) | False | usp1 |
| XM_026916618.2 | mRNA | downstream | 178190 | 22035213 ~ 22046195 (-) | False | usp1 |
| XM_034300900.1 | mRNA | upstream | 92475 | 22319135 ~ 22322050 (-) | True | mafaa |
| XM_034311953.1 | mRNA | upstream | 100795 | 22327455 ~ 22390555 (-) | True | zc3h3 |
| XM_034311946.1 | mRNA | upstream | 163593 | 22390253 ~ 22392793 (-) | True | LOC117599264 |
| XM_026933520.2 | mRNA | upstream | 257432 | 22484092 ~ 22514058 (-) | True | adcyap1r1b |
| XM_034300001.1 | mRNA | upstream | 320594 | 22547254 ~ 22552299 (-) | True | LOC113538473 |
| XR_004580163.1 | other | downstream | 692957 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 1389497 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 3674070 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 3854489 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 4404169 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 4413173 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
