Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37582 |
| length | 1180 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G31878 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 22504504 ~ 22514013 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37560 | lncRNA | upstream | 19057 | 22481404 ~ 22485447 (+) | True | G31856 |
| TU37451 | lncRNA | upstream | 179167 | 22325121 ~ 22325337 (+) | True | G31760 |
| TU37435 | lncRNA | upstream | 182458 | 22317683 ~ 22322046 (+) | True | G31744 |
| XR_004579714.1 | lncRNA | upstream | 273489 | 22227215 ~ 22231015 (+) | True | LOC117599246 |
| XR_004579713.1 | lncRNA | upstream | 282978 | 22220382 ~ 22221526 (+) | True | LOC117599245 |
| TU37666 | lncRNA | downstream | 68336 | 22582349 ~ 22585190 (+) | True | G31944 |
| TU37722 | lncRNA | downstream | 295382 | 22809395 ~ 22811006 (+) | True | G31979 |
| XR_004579611.1 | lncRNA | downstream | 474108 | 22988121 ~ 23026499 (+) | True | LOC117599173 |
| XR_003403844.2 | lncRNA | downstream | 663919 | 23177932 ~ 23187094 (+) | True | LOC113538428 |
| TU38127 | lncRNA | downstream | 941947 | 23455960 ~ 23458710 (+) | False | G32310 |
| XM_026933453.2 | mRNA | upstream | 29942 | 22426920 ~ 22474562 (+) | True | ghrhrb |
| XM_026933454.2 | mRNA | upstream | 29942 | 22426920 ~ 22474562 (+) | False | ghrhrb |
| XM_026933383.2 | mRNA | upstream | 98025 | 22392828 ~ 22406479 (+) | False | cyldl |
| XM_026933369.2 | mRNA | downstream | 38803 | 22552816 ~ 22560612 (+) | True | akr1a1b |
| XM_026933365.2 | mRNA | downstream | 49226 | 22563239 ~ 22570318 (+) | False | nasp |
| XM_026933364.2 | mRNA | downstream | 49227 | 22563240 ~ 22570318 (+) | True | nasp |
| XM_026933366.2 | mRNA | downstream | 49230 | 22563243 ~ 22570318 (+) | False | nasp |
| XM_026933323.2 | mRNA | downstream | 83582 | 22597595 ~ 22603436 (+) | True | tmem69 |
| TU36319 | other | upstream | 1487057 | 21014858 ~ 21017447 (+) | False | insl5a |
| XR_003403752.1 | other | upstream | 2394279 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU35395 | other | upstream | 2967490 | 19534441 ~ 19537014 (+) | False | smx5 |
| TU34871 | other | upstream | 3677584 | 18774770 ~ 18826920 (+) | False | G29569 |
| XR_004579462.1 | other | downstream | 84328 | 22598341 ~ 22602338 (+) | False | tmem69 |
| trnaf-gaa_16 | other | downstream | 961938 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
| TU38551 | other | downstream | 1506365 | 24020378 ~ 24021036 (+) | True | G32684 |
| TU38758 | other | downstream | 2138977 | 24652990 ~ 24653965 (+) | False | LOC117598985 |
| TU38760 | other | downstream | 2139172 | 24653185 ~ 24653965 (+) | False | LOC117598985 |
