Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37625 |
| length | 509 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G31916 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 22538323 ~ 22560608 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37446 | lncRNA | downstream | 222317 | 22315806 ~ 22316006 (-) | True | G31755 |
| TU37433 | lncRNA | downstream | 311663 | 22224385 ~ 22226660 (-) | True | G31742 |
| XR_004579710.1 | lncRNA | downstream | 340655 | 22196594 ~ 22197668 (-) | True | LOC117599242 |
| XR_004579711.1 | lncRNA | downstream | 362583 | 22173351 ~ 22175740 (-) | True | LOC117599244 |
| XR_004577195.1 | lncRNA | downstream | 405625 | 22130425 ~ 22132698 (-) | True | LOC117596032 |
| TU37647 | lncRNA | upstream | 4684 | 22565292 ~ 22568836 (-) | True | G31934 |
| TU37648 | lncRNA | upstream | 4684 | 22565292 ~ 22568836 (-) | False | G31934 |
| TU37658 | lncRNA | upstream | 17023 | 22577631 ~ 22577835 (-) | False | ccdc17 |
| TU37680 | lncRNA | upstream | 21740 | 22582348 ~ 22585190 (-) | False | gpbp1l1 |
| TU37952 | lncRNA | upstream | 150605 | 22711213 ~ 22785690 (-) | True | G32157 |
| XM_026933520.2 | mRNA | downstream | 24265 | 22484092 ~ 22514058 (-) | True | adcyap1r1b |
| XM_034311946.1 | mRNA | downstream | 145530 | 22390253 ~ 22392793 (-) | True | LOC117599264 |
| XM_034311953.1 | mRNA | downstream | 147768 | 22327455 ~ 22390555 (-) | True | zc3h3 |
| XM_034300900.1 | mRNA | downstream | 216273 | 22319135 ~ 22322050 (-) | True | mafaa |
| XM_034314538.1 | mRNA | downstream | 338689 | 22157708 ~ 22199634 (-) | True | LOC117599932 |
| XM_026933625.2 | mRNA | upstream | 11824 | 22572432 ~ 22581943 (-) | True | ccdc17 |
| XM_026933319.2 | mRNA | upstream | 21695 | 22582303 ~ 22593861 (-) | True | gpbp1l1 |
| XM_034312142.1 | mRNA | upstream | 212518 | 22773126 ~ 22964855 (-) | False | pik3r3b |
| XM_034312138.1 | mRNA | upstream | 212518 | 22773126 ~ 22964855 (-) | False | pik3r3b |
| XM_026933188.2 | mRNA | upstream | 212518 | 22773126 ~ 22964855 (-) | True | pik3r3b |
| XR_004580163.1 | other | downstream | 1006895 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 1055549 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 3340122 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 3520541 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 4070221 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 4079225 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
