Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU37952 |
| length | 1005 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G32157 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 22711213 ~ 22785690 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37680 | lncRNA | downstream | 126023 | 22582348 ~ 22585190 (-) | False | gpbp1l1 |
| TU37658 | lncRNA | downstream | 133378 | 22577631 ~ 22577835 (-) | False | ccdc17 |
| TU37647 | lncRNA | downstream | 142377 | 22565292 ~ 22568836 (-) | True | G31934 |
| TU37648 | lncRNA | downstream | 142377 | 22565292 ~ 22568836 (-) | False | G31934 |
| TU37625 | lncRNA | downstream | 150605 | 22538323 ~ 22560608 (-) | True | G31916 |
| XR_003403825.2 | lncRNA | upstream | 204757 | 22990447 ~ 22995189 (-) | True | LOC113538262 |
| TU38041 | lncRNA | upstream | 256841 | 23042531 ~ 23042762 (-) | True | G32244 |
| TU38121 | lncRNA | upstream | 439392 | 23225082 ~ 23225389 (-) | False | dmrt2b |
| TU38487 | lncRNA | upstream | 893092 | 23678782 ~ 23683686 (-) | True | G32629 |
| TU38557 | lncRNA | upstream | 1234435 | 24020125 ~ 24020779 (-) | True | G32686 |
| XM_026933319.2 | mRNA | downstream | 117352 | 22582303 ~ 22593861 (-) | True | gpbp1l1 |
| XM_026933625.2 | mRNA | downstream | 129270 | 22572432 ~ 22581943 (-) | True | ccdc17 |
| XM_034300001.1 | mRNA | downstream | 158914 | 22547254 ~ 22552299 (-) | True | LOC113538473 |
| XM_026933622.2 | mRNA | upstream | 262896 | 23048586 ~ 23062081 (-) | False | pomgnt1 |
| XM_026933621.2 | mRNA | upstream | 262896 | 23048586 ~ 23062081 (-) | True | pomgnt1 |
| XM_034312071.1 | mRNA | upstream | 277837 | 23063527 ~ 23071529 (-) | True | prpf38a |
| XM_026933572.2 | mRNA | upstream | 300917 | 23086607 ~ 23095386 (-) | True | mpl |
| XM_034312063.1 | mRNA | upstream | 300917 | 23086607 ~ 23093888 (-) | False | mpl |
| XR_004580163.1 | other | downstream | 1179785 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 830467 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 3115040 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 3295459 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 3845139 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 3854143 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
