Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU38041 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G32244 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 23042531 ~ 23042762 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403825.2 | lncRNA | downstream | 47342 | 22990447 ~ 22995189 (-) | True | LOC113538262 |
| TU37952 | lncRNA | downstream | 256841 | 22711213 ~ 22785690 (-) | True | G32157 |
| TU37680 | lncRNA | downstream | 457341 | 22582348 ~ 22585190 (-) | False | gpbp1l1 |
| TU37658 | lncRNA | downstream | 464696 | 22577631 ~ 22577835 (-) | False | ccdc17 |
| TU37647 | lncRNA | downstream | 473695 | 22565292 ~ 22568836 (-) | True | G31934 |
| TU38121 | lncRNA | upstream | 182320 | 23225082 ~ 23225389 (-) | False | dmrt2b |
| TU38487 | lncRNA | upstream | 636020 | 23678782 ~ 23683686 (-) | True | G32629 |
| TU38557 | lncRNA | upstream | 977363 | 24020125 ~ 24020779 (-) | True | G32686 |
| TU38651 | lncRNA | upstream | 1175731 | 24218493 ~ 24218937 (-) | True | G32777 |
| TU38655 | lncRNA | upstream | 1216544 | 24259306 ~ 24259855 (-) | True | G32781 |
| XM_034312142.1 | mRNA | downstream | 77676 | 22773126 ~ 22964855 (-) | False | pik3r3b |
| XM_034312138.1 | mRNA | downstream | 77676 | 22773126 ~ 22964855 (-) | False | pik3r3b |
| XM_026933188.2 | mRNA | downstream | 77676 | 22773126 ~ 22964855 (-) | True | pik3r3b |
| XM_026933189.2 | mRNA | downstream | 249208 | 22773126 ~ 22793323 (-) | False | pik3r3b |
| XM_026933190.2 | mRNA | downstream | 249557 | 22773126 ~ 22792974 (-) | False | pik3r3b |
| XM_026933622.2 | mRNA | upstream | 5824 | 23048586 ~ 23062081 (-) | False | pomgnt1 |
| XM_026933621.2 | mRNA | upstream | 5824 | 23048586 ~ 23062081 (-) | True | pomgnt1 |
| XM_034312071.1 | mRNA | upstream | 20765 | 23063527 ~ 23071529 (-) | True | prpf38a |
| XM_026933572.2 | mRNA | upstream | 43845 | 23086607 ~ 23095386 (-) | True | mpl |
| XM_034312063.1 | mRNA | upstream | 43845 | 23086607 ~ 23093888 (-) | False | mpl |
| XR_004580163.1 | other | downstream | 1511103 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_003403848.2 | other | upstream | 573395 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004577321.1 | other | upstream | 2857968 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 3038387 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 3588067 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 3597071 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
