Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU39472 |
| length | 723 |
| lncRNA type | sense_over |
| GC content | 0.51 |
| exon number | 2 |
| gene id | nbeal1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 25680090 ~ 25738817 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579559.1 | lncRNA | downstream | 70334 | 25658315 ~ 25661964 (-) | True | LOC117599130 |
| TU39435 | lncRNA | downstream | 70607 | 25660913 ~ 25661691 (-) | False | LOC117599130 |
| TU39061 | lncRNA | downstream | 300330 | 25431758 ~ 25431968 (-) | True | G33166 |
| XR_003403852.2 | lncRNA | downstream | 491945 | 25206722 ~ 25240353 (-) | True | LOC113538494 |
| TU38817 | lncRNA | downstream | 907864 | 24824235 ~ 24824434 (-) | True | G32923 |
| TU39514 | lncRNA | upstream | 98524 | 25837298 ~ 25843332 (-) | True | G33538 |
| TU39625 | lncRNA | upstream | 338601 | 26077375 ~ 26077901 (-) | True | G33621 |
| TU39619 | lncRNA | upstream | 350604 | 26089378 ~ 26109660 (-) | True | G33617 |
| TU39620 | lncRNA | upstream | 350604 | 26089378 ~ 26106225 (-) | False | G33617 |
| TU39654 | lncRNA | upstream | 483689 | 26222463 ~ 26227188 (-) | True | G33645 |
| XM_026933608.2 | mRNA | downstream | 57802 | 25662000 ~ 25674496 (-) | False | rbm26 |
| XM_026933607.2 | mRNA | downstream | 57803 | 25662000 ~ 25674495 (-) | True | rbm26 |
| XM_034310133.1 | mRNA | downstream | 151756 | 25570021 ~ 25580542 (-) | True | obi1 |
| XM_026933140.2 | mRNA | downstream | 152831 | 25570021 ~ 25579467 (-) | False | obi1 |
| XM_026933502.2 | mRNA | downstream | 168209 | 25560790 ~ 25564089 (-) | True | pou4f1 |
| XM_026933620.2 | mRNA | upstream | 6609 | 25745383 ~ 25755348 (-) | True | stradb |
| XM_034312679.1 | mRNA | upstream | 56452 | 25795226 ~ 25811707 (-) | False | trim25l |
| XM_026933419.2 | mRNA | upstream | 56453 | 25795227 ~ 25811707 (-) | False | trim25l |
| XM_034312676.1 | mRNA | upstream | 56454 | 25795228 ~ 25813178 (-) | False | trim25l |
| XM_026933420.2 | mRNA | upstream | 56454 | 25795228 ~ 25811707 (-) | False | trim25l |
| XR_003403848.2 | other | downstream | 2100285 | 23616157 ~ 23632013 (-) | False | uap1 |
| XR_004580160.1 | other | downstream | 4200870 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004577321.1 | other | upstream | 161956 | 25900730 ~ 25907994 (-) | False | LOC113538393 |
| XR_003403851.2 | other | upstream | 342375 | 26081149 ~ 26105456 (-) | False | slc19a1 |
| TU39875 | other | upstream | 892055 | 26630829 ~ 26638504 (-) | True | ecrg4b |
| TU39865 | other | upstream | 901059 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
| TU39866 | other | upstream | 901059 | 26639833 ~ 26649379 (-) | False | si:ch73-23l24.1 |
