Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403845.2 |
| length | 1366 |
| RNA type | misc_RNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | st6gal2b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 26613650 ~ 26649387 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0043412 | macromolecule modification | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39398 | lncRNA | upstream | 55245 | 26557888 ~ 26558405 (+) | True | G33440 |
| TU39362 | lncRNA | upstream | 202194 | 26411256 ~ 26411456 (+) | True | G33410 |
| TU39342 | lncRNA | upstream | 205254 | 26337243 ~ 26408396 (+) | False | agap1 |
| TU39349 | lncRNA | upstream | 295863 | 26313015 ~ 26317787 (+) | True | G33397 |
| TU39346 | lncRNA | upstream | 308906 | 26298996 ~ 26304744 (+) | True | G33395 |
| TU39836 | lncRNA | downstream | 10567 | 26640418 ~ 26642174 (+) | False | st6gal2b |
| TU39839 | lncRNA | downstream | 12355 | 26642206 ~ 26649387 (+) | True | st6gal2b |
| TU39984 | lncRNA | downstream | 180607 | 26810458 ~ 26820107 (+) | False | LOC113538244 |
| XR_004579527.1 | lncRNA | downstream | 180619 | 26810470 ~ 26826974 (+) | True | LOC113538244 |
| TU40051 | lncRNA | downstream | 261256 | 26891107 ~ 26891387 (+) | True | G33969 |
| XM_026933362.2 | mRNA | upstream | 6920 | 26557019 ~ 26606730 (+) | True | lrrfip1b |
| XM_026933363.2 | mRNA | upstream | 6920 | 26557020 ~ 26606730 (+) | False | lrrfip1b |
| XM_026933355.2 | mRNA | upstream | 15846 | 26557016 ~ 26597804 (+) | False | lrrfip1b |
| XM_034313944.1 | mRNA | upstream | 15846 | 26557016 ~ 26597804 (+) | False | lrrfip1b |
| XM_034313939.1 | mRNA | upstream | 15846 | 26557016 ~ 26597804 (+) | False | lrrfip1b |
| XM_026933434.2 | mRNA | downstream | 84133 | 26713984 ~ 26733596 (+) | True | fhl2b |
| XM_026933318.2 | mRNA | downstream | 106638 | 26736489 ~ 26759429 (+) | True | tgfbrap1 |
| XM_026933317.2 | mRNA | downstream | 106641 | 26736492 ~ 26759429 (+) | False | tgfbrap1 |
| XM_026933197.2 | mRNA | downstream | 569168 | 27199019 ~ 27268197 (+) | True | inpp4ab |
| XM_026933200.2 | mRNA | downstream | 569168 | 27199019 ~ 27268197 (+) | False | inpp4ab |
| TU38758 | other | upstream | 1959685 | 24652990 ~ 24653965 (+) | False | LOC117598985 |
| TU38760 | other | upstream | 1959685 | 24653185 ~ 24653965 (+) | False | LOC117598985 |
| TU38551 | other | upstream | 2592614 | 24020378 ~ 24021036 (+) | True | G32684 |
| trnaf-gaa_16 | other | upstream | 3137627 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
| XR_004579462.1 | other | upstream | 4011312 | 22598341 ~ 22602338 (+) | False | tmem69 |
| TU39837 | other | downstream | 743 | 26630594 ~ 26648369 (+) | False | st6gal2b |
| XR_003403829.2 | other | downstream | 1139945 | 27769796 ~ 27787602 (+) | False | adam23a |
| trnar-ccg_4 | other | downstream | 1542791 | 28172642 ~ 28172714 (+) | True | trnar-ccg_4 |
| trnas-aga_1 | other | downstream | 1623619 | 28253470 ~ 28253551 (+) | True | trnas-aga_1 |
| TU41602 | other | downstream | 2827024 | 29456875 ~ 29457426 (+) | True | G35262 |
