Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403257.2 |
| length | 1033 |
| RNA type | misc_RNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | pxmp4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 14872948 ~ 14875990 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32421 | lncRNA | downstream | 12703 | 14860005 ~ 14860246 (-) | True | G27484 |
| TU32377 | lncRNA | downstream | 82308 | 14790431 ~ 14790641 (-) | True | G27448 |
| TU32201 | lncRNA | downstream | 380110 | 14492637 ~ 14492839 (-) | True | G27303 |
| TU32157 | lncRNA | downstream | 418658 | 14444626 ~ 14454291 (-) | True | G27259 |
| TU32152 | lncRNA | downstream | 471520 | 14354841 ~ 14401429 (-) | True | G27254 |
| TU32441 | lncRNA | upstream | 8265 | 14884255 ~ 14884487 (-) | True | G27502 |
| TU32551 | lncRNA | upstream | 134335 | 15010325 ~ 15010661 (-) | True | G27600 |
| TU32615 | lncRNA | upstream | 188895 | 15064885 ~ 15065211 (-) | True | G27652 |
| TU32663 | lncRNA | upstream | 254013 | 15130003 ~ 15130260 (-) | True | G27699 |
| TU32669 | lncRNA | upstream | 268715 | 15144705 ~ 15146155 (-) | True | G27705 |
| XM_026923672.2 | mRNA | downstream | 3246 | 14862967 ~ 14869703 (-) | False | tgm5l |
| XM_026923681.2 | mRNA | downstream | 3246 | 14863000 ~ 14869703 (-) | False | tgm5l |
| XM_026923663.2 | mRNA | downstream | 3246 | 14863233 ~ 14869703 (-) | True | tgm5l |
| XM_026913137.2 | mRNA | downstream | 58502 | 14797637 ~ 14814447 (-) | True | vstm2l |
| XM_026927231.2 | mRNA | upstream | 11475 | 14887465 ~ 15009183 (-) | True | LOC113534431 |
| XM_034300435.1 | mRNA | upstream | 14445 | 14890435 ~ 15009183 (-) | False | LOC113534431 |
| XM_034300444.1 | mRNA | upstream | 14445 | 14890435 ~ 14974051 (-) | False | LOC113534431 |
| XM_026929263.2 | mRNA | upstream | 134837 | 15010827 ~ 15024533 (-) | True | LOC113535748 |
| XM_026929270.2 | mRNA | upstream | 134837 | 15010827 ~ 15016270 (-) | False | LOC113535748 |
| trnae-cuc_5 | other | downstream | 480598 | 14392280 ~ 14392351 (-) | True | trnae-cuc_5 |
| TU31994 | other | downstream | 814504 | 14050401 ~ 14058445 (-) | True | G27107 |
| XR_004579719.1 | other | downstream | 965760 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31814 | other | downstream | 1238297 | 13632262 ~ 13634652 (-) | False | rps26l |
| TU31648 | other | downstream | 1372965 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| TU32819 | other | upstream | 421319 | 15297309 ~ 15299019 (-) | True | G27843 |
| TU32916 | other | upstream | 580645 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32920 | other | upstream | 585960 | 15461950 ~ 15469229 (-) | False | oxtr |
| TU34409 | other | upstream | 2396965 | 17272955 ~ 17280173 (-) | True | G29158 |
| XR_004577384.1 | other | upstream | 2637722 | 17513712 ~ 17529315 (-) | False | si:dkey-44g17.6 |
