Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311036.1 |
| length | 1383 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 11 |
| gene id | nme7 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 20207755 ~ 20246008 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006165 | nucleoside diphosphate phosphorylation | biological_process |
| GO:0006183 | GTP biosynthetic process | biological_process |
| GO:0006228 | UTP biosynthetic process | biological_process |
| GO:0006241 | CTP biosynthetic process | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004550 | nucleoside diphosphate kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35898 | lncRNA | downstream | 23 | 20199533 ~ 20207732 (-) | True | G30412 |
| XR_004579569.1 | lncRNA | downstream | 8239 | 20197220 ~ 20199516 (-) | True | LOC117599142 |
| TU35799 | lncRNA | downstream | 95237 | 20104252 ~ 20112518 (-) | True | G30320 |
| TU35741 | lncRNA | downstream | 193750 | 20012425 ~ 20014005 (-) | False | glmnb |
| TU35735 | lncRNA | downstream | 221836 | 19984675 ~ 19985919 (-) | True | G30270 |
| TU35910 | lncRNA | upstream | 597 | 20246605 ~ 20246871 (-) | True | G30421 |
| TU35911 | lncRNA | upstream | 1103 | 20247111 ~ 20247337 (-) | True | G30422 |
| TU35912 | lncRNA | upstream | 2158 | 20248166 ~ 20248509 (-) | True | G30423 |
| TU35920 | lncRNA | upstream | 68830 | 20314838 ~ 20315511 (-) | True | G30428 |
| TU35992 | lncRNA | upstream | 113833 | 20359841 ~ 20360828 (-) | False | pex5la |
| XM_026923691.2 | mRNA | downstream | 24461 | 20172128 ~ 20183294 (-) | True | dpt |
| XM_026921732.2 | mRNA | downstream | 51596 | 20146385 ~ 20156159 (-) | True | zbtb11 |
| XM_026921212.2 | mRNA | downstream | 65498 | 20112945 ~ 20142257 (-) | False | dipk1ab |
| XM_026921221.2 | mRNA | downstream | 65498 | 20112945 ~ 20142257 (-) | True | dipk1ab |
| XM_034313310.1 | mRNA | downstream | 106557 | 20039757 ~ 20101198 (-) | False | evi5b |
| XM_026926703.2 | mRNA | upstream | 4107 | 20250115 ~ 20258553 (-) | False | LOC113534100 |
| XM_034311024.1 | mRNA | upstream | 4107 | 20250115 ~ 20258553 (-) | True | LOC113534100 |
| XM_026943439.2 | mRNA | upstream | 19305 | 20265313 ~ 20310226 (-) | True | tmem131 |
| XM_026927143.2 | mRNA | upstream | 78850 | 20324858 ~ 20328459 (-) | True | mrpl47 |
| XM_026917435.2 | mRNA | upstream | 113714 | 20359722 ~ 20429325 (-) | False | pex5la |
| trnap-cgg_1 | other | downstream | 821242 | 19386442 ~ 19386513 (-) | True | trnap-cgg_1 |
| trnap-ugg_1 | other | downstream | 827243 | 19380441 ~ 19380512 (-) | True | trnap-ugg_1 |
| trnap-ugg | other | downstream | 1390557 | 18817127 ~ 18817198 (-) | True | trnap-ugg |
| trnag-ucc | other | downstream | 1391425 | 18816259 ~ 18816330 (-) | True | trnag-ucc |
| TU34886 | other | downstream | 1401005 | 18794032 ~ 18806750 (-) | False | LOC113537624 |
| XR_004580158.1 | other | upstream | 1217853 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580163.1 | other | upstream | 1217853 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580160.1 | other | upstream | 1217853 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580156.1 | other | upstream | 1217853 | 21463861 ~ 21531428 (-) | False | raver2 |
| XR_004580159.1 | other | upstream | 1217853 | 21463861 ~ 21531428 (-) | False | raver2 |
