Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311045.1 |
| length | 1246 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 9 |
| gene id | zgc:172121 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 20245574 ~ 20249458 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0032259 | methylation | biological_process |
| GO:0008898 | S-adenosylmethionine-homocysteine S-methyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35863 | lncRNA | upstream | 10802 | 20233975 ~ 20234772 (+) | True | G30382 |
| TU35757 | lncRNA | upstream | 205600 | 20037735 ~ 20039974 (+) | True | G30288 |
| TU35929 | lncRNA | downstream | 84382 | 20333743 ~ 20334121 (+) | True | G30436 |
| TU35935 | lncRNA | downstream | 111229 | 20360590 ~ 20361838 (+) | True | G30442 |
| TU35938 | lncRNA | downstream | 118452 | 20367813 ~ 20368152 (+) | True | G30445 |
| TU35941 | lncRNA | downstream | 123345 | 20372706 ~ 20373062 (+) | True | G30448 |
| TU35948 | lncRNA | downstream | 131409 | 20380770 ~ 20380982 (+) | True | G30455 |
| XM_026923907.2 | mRNA | upstream | 37821 | 20199525 ~ 20207753 (+) | True | atp1b1a |
| XM_026921295.2 | mRNA | upstream | 133055 | 20104204 ~ 20112519 (+) | True | rpl5b |
| XM_034310260.1 | mRNA | upstream | 225348 | 20000046 ~ 20020226 (+) | True | LOC113543059 |
| XM_034310262.1 | mRNA | upstream | 233223 | 20000046 ~ 20012351 (+) | False | LOC113543059 |
| XM_026941073.2 | mRNA | upstream | 242249 | 20000046 ~ 20003325 (+) | False | LOC113543059 |
| XM_034311038.1 | mRNA | downstream | 9460 | 20258821 ~ 20265493 (+) | True | si:ch211-201h21.5 |
| XM_026927129.2 | mRNA | downstream | 65664 | 20315025 ~ 20324579 (+) | True | actl6a |
| XM_026942739.2 | mRNA | downstream | 80082 | 20329443 ~ 20333691 (+) | True | ndufb5 |
| XM_026917400.2 | mRNA | downstream | 86270 | 20335631 ~ 20359651 (+) | False | usp13 |
| XM_026917375.2 | mRNA | downstream | 86271 | 20335632 ~ 20359651 (+) | False | usp13 |
| XR_003403752.1 | other | upstream | 135349 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU35395 | other | upstream | 708560 | 19534441 ~ 19537014 (+) | False | smx5 |
| TU34871 | other | upstream | 1418654 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | upstream | 1428099 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU33403 | other | upstream | 4063271 | 16181318 ~ 16182303 (+) | False | mustn1a |
| TU36319 | other | downstream | 765497 | 21014858 ~ 21017447 (+) | False | insl5a |
| XR_004579462.1 | other | downstream | 2348980 | 22598341 ~ 22602338 (+) | False | tmem69 |
| trnaf-gaa_16 | other | downstream | 3226590 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
| TU38551 | other | downstream | 3771017 | 24020378 ~ 24021036 (+) | True | G32684 |
| TU38758 | other | downstream | 4403629 | 24652990 ~ 24653965 (+) | False | LOC117598985 |
